| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6505 |
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| Symbol | |
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| ID | 8548922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 8934823 |
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| End bp | 8936022 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646391168 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_003270867 |
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| Protein GI | 262199658 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.136453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAC CGCCTGCCAC CGTTCCGCCC GTGGATGTCT CGGCGATCCT CGATCGTCTC
GAGACGCCCG TGTATCTGTG CGACCTCGGC CGTCTGCGCA AGAACCTCGA GATCCTGGCC
GATGCCCAGC GCCGCGCCGA GTGCAAGATC CTGCTCGCGC TCAAGGGTTT TGCGATGTGG
AGCGTGTTTC CCATCGTGCG CGAGTACCTC TCGGGCGTGG CCACCAGCTC GGTGGCCGAG
GCCCGGCTCG GCCGCGAGGA GTTCTGCGGC GACAGCGATC GCTTCGAGGT CCACGCCTAC
GCGCCCGCGT ACACCGACGC CGATATCGAC GAGCTGGTCG AACTCAGCGA TCACATCGTC
TTCAACTCGG TGGCCCAGTG GCAGCGTCAC GGTCCGCGCG TGCGCGCGGC CGGTCGCGAC
ATCGAGTGCG CCCTGCGCCT CAACCCGCGC CACTCGGAAG TCGAGGTGGC GCTCTACGAC
CCCTGCGCCA GCTTCTCGCG CCTGGGCATC ACGCCCGAGA ACTTCCCGGC GCCGGGCGCG
CCCGAGCTCG ACGGCATCTC GGGGCTGCAC TTCCACACCC TGTGCGAGCT CGGCTCCGAT
GCGCTCGAGC GCACCGTGGC CGCGGTCGAG GAGCGCTTCG GCGAGCACCT CGGCAAGGTC
CGCTGGGTCA ACTTCGGCGG CGGTCACCAC ATCACCCGCC CCGACTACGA CATCGAGCGC
CTGGTGCGCG TGGTGCGCGG CTTCCAGGAT CGCCACGGCG TGGCCGTGTA CCTCGAGCCC
GGCGAGGCCA TCGCGCTCAA CACCGGCGTG CTGGTGGCCT CGGTGCTCGA TGTCGGACAC
AACGACATGA ACCTGGCCAT CCTCGACACC TCGGCGACCG CGCACATGCC CGACGTGCTC
GAGATGCCCT ACCGGCCGGT GATCACGGGC GCGGGCGCGC CCGGCGAGCT GGCCCACACC
TACCGCCTGG GCGGGCTCAC CTGCCTGGCC GGCGACGTCA TCGGTGACTA CTCCTTCGCC
GAGCCGCTGC AGGTCGGTGA CAAGCTGGTG TTCGGCGACA TGGCCCACTA CACCATGGTC
AAGAACACCA CCTTCAACGG CGTGCGCCTG CCCGATATCG CCACCTACGA GCCGGATACG
CAGGCTGTCG AGGTGGTGCG CCGCTTCGGC TACGAAGACT ACAAGAACCG GCTGTCCTGA
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| Protein sequence | MSTPPATVPP VDVSAILDRL ETPVYLCDLG RLRKNLEILA DAQRRAECKI LLALKGFAMW
SVFPIVREYL SGVATSSVAE ARLGREEFCG DSDRFEVHAY APAYTDADID ELVELSDHIV
FNSVAQWQRH GPRVRAAGRD IECALRLNPR HSEVEVALYD PCASFSRLGI TPENFPAPGA
PELDGISGLH FHTLCELGSD ALERTVAAVE ERFGEHLGKV RWVNFGGGHH ITRPDYDIER
LVRVVRGFQD RHGVAVYLEP GEAIALNTGV LVASVLDVGH NDMNLAILDT SATAHMPDVL
EMPYRPVITG AGAPGELAHT YRLGGLTCLA GDVIGDYSFA EPLQVGDKLV FGDMAHYTMV
KNTTFNGVRL PDIATYEPDT QAVEVVRRFG YEDYKNRLS
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