Gene Hoch_6473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6473 
Symbol 
ID8548890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8886383 
End bp8886727 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content65% 
IMG OID646391136 
ProductSterol-binding domain protein 
Protein accessionYP_003270835 
Protein GI262199626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCT CCCCCCCGAG CGCGCAAGAA CTCTTCAACG AACGCATGCC CAAAGCGCTC 
GAGAGTCATC CCGACAGAGC GCGCCAGGTC AACGCGATCT ACTCGTTCGA CATCTCGGGC
GAGGGTGGCG GCCAGTGGAC GGTGGACCTC ACCAAGGACA CGCCCACGGT CGAGAAGGGC
CTGCCGGGCA CCGCGCAGTG CACCATCGCC ATGGATCACG CCGATTTCCA GGAGATGCTC
AAAGACCCCC AGGTCGGCAT GCAGCTCTAC TTCCAGGGCA AACTCACGGT CGCCGGCGAC
CCCGCCCTGG CGGCCAAGCT CCAGGAGTTC TTCCAGCTCG TCTGA
 
Protein sequence
MSSSPPSAQE LFNERMPKAL ESHPDRARQV NAIYSFDISG EGGGQWTVDL TKDTPTVEKG 
LPGTAQCTIA MDHADFQEML KDPQVGMQLY FQGKLTVAGD PALAAKLQEF FQLV