Gene Hoch_6448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6448 
Symbol 
ID8548863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp8851222 
End bp8852082 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content63% 
IMG OID646391109 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_003270810 
Protein GI262199601 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.168639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACC TCGACGAACT CGAAGATCAG TCTGTCTACA TCTTCCGCGA GGCCTTCAAG 
CACTTCAAAC AGCTCTGCAT GCTGTGGTCC ATCGGTAAGG ATTCCACGGT CATGCTGTGG
TTGGCGCGCA AGGCCTTCTT CGGACACGTC CCCTTTCCGC TGGTGCACAT CGATACCTCC
TACAAGGTGC CGTCGATGAT CACCTACCGC GACGACCTGG CGCGGCGCTG GGGTCTGGAG
ATGGTGGTCG GACAAAACCG TCAGGCGCTG GCCGACGGCA TGAACCACAC CCGCGGCCGC
ATGATCTGCT GTCGCGCGCT CAAGACCGAC GCCCTGGTCA ACACGCTGTC GGGGGCGTGG
CCGCGGATGC GCATGGATCC CGAGGGCGTG TATCAAGAAG AGGTGGGCGG CGAGCCCTTC
ACCGGCGTCA TCGTCGGGGC CCGCGCCGAC GAGGAGGGGT CGCGCGCCAA GGAGCGCTAC
TTCTCGCCGC GCGATAAGAA CAGTGACTGG TCGGTATCGG ACCAGCCGCC GGAGCTGTGG
AACCAGTTCA AGACCGAGTT CGCGCCCGGC ACCCACGTGC GCATTCACCC GCTGCTCGAC
TGGACCGAGG TCAACATCTG GGAGTACATC GAGCGCGAGA ACATCCCGAT CATCGACCTG
TACTTCGACA GGGGCGATGG CAAGCGCTAC CGCTCCATCG GCTGCGAGAC CTGCACCGGC
ATGATCGAAT CGAGCGCGAC CTCGCCGGCC GAGATCATCG TCGAGCTGCG CAAGACCAAC
ATCCCGGAGC GCGCGGGACG CGCTCAGGAT CAGGAAGACA CCTACGCCAT GGAGAAGCTC
CGGCGGGAAG GATACATGTA A
 
Protein sequence
MSHLDELEDQ SVYIFREAFK HFKQLCMLWS IGKDSTVMLW LARKAFFGHV PFPLVHIDTS 
YKVPSMITYR DDLARRWGLE MVVGQNRQAL ADGMNHTRGR MICCRALKTD ALVNTLSGAW
PRMRMDPEGV YQEEVGGEPF TGVIVGARAD EEGSRAKERY FSPRDKNSDW SVSDQPPELW
NQFKTEFAPG THVRIHPLLD WTEVNIWEYI ERENIPIIDL YFDRGDGKRY RSIGCETCTG
MIESSATSPA EIIVELRKTN IPERAGRAQD QEDTYAMEKL RREGYM