| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5659 |
|---|
| Symbol | |
|---|
| ID | 8548073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 7766236 |
|---|
| End bp | 7767642 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 646390327 |
|---|
| Product | protein of unknown function DUF1025 |
|---|
| Protein accession | YP_003270029 |
|---|
| Protein GI | 262198820 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3824] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.709029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.19565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG GACGCTACAT CCGCTTCGCC CTCGCGAGCG TGCCCGCCTT CGGGCTCGGA
CTCGCGCTCG GGCTGTGGTG GACCCGGGCT CCGGCCGCGG CTCCCGCGGG TGCCGAGGCG
AGCGCAACCG CGAATGCCGC GGCGATCGCG GGCGATGGCG ACTCCGGAGG CGACTCCCGT
GGCAACGGCG GCCGGGACGC GGACAGCGGC GCCCGAGCGC TGGGCAACCC GCCGGCGCGC
GCCGAGGGCG CGGTCGAGCT CGGCGAGCGC GTGCCCTTTG CCAACTGCGA GCTGCCGATT
CCGGCGCTCG ACGGTCATCC TCACGACCCG CCCGCGGACA GCGGCGCATG GGCCGCGGAC
GAGCTCGACC TGGTGCTCGA CCTGGCCGCC GATCACTACG AGAGCGGCGA CTATCTGACC
GCGTACGGCT GCGCCGAGCT GGCCGCCGAC GTCGCGCCCG CCGCGGTCGA CGCCCACCAT
CTGCGCGCCT CCGCGGCCGC CGCGCTGGGC TATGACGAGG TCGCCCGCGG CGCCTACGCC
ATGGCCCTGG CGCTCGATCC CGACGATCCC GAGACCCTGG GCGCGGCCGC CGATTTCTAC
ATCAACGTGC AGAACCCCAA GCGCCGCGAC ACCACCATGC TGGGCTACGA GTACGCGCAT
CGCGGCCGCA CCCAGGCGCT GGCCCGGCGC CGTCACATGC GGCCGCTGCG CGCGCGGCTC
ACGCTGCTCG AGGCCCAGGC GCTCAACGAT CTCGGCGTCG CCGACCAGGC CCTGCTGCGC
GTCGAGGAGA CCCTGCGCCT GGAGCCGGCG CTATCCGAGG CCAAGTACGA GCGCGCGGTG
TCGCTGCTGA ACCTGTGCCG CTTCGAGGAC GCGGCCCGCG CCTTCGAAGC CGCGCTGGCG
CTGGCGCCCG ACGATCCCTA CGCGCACCAT CATCTGGGCA TGGTCTACGA GTGGCTGGGA
CGCGAGGACG ACGCCGACAG CCACCAGGCC ATCGCGCGCT CGCTGGCGCC CGAGGAGTTC
TTGCCGCCGG TGCTGCTGTC GTCCGAGGCC TTTCACGCCG AGCTGGCGCG CGCGGTGGCC
GAGCTGCCGG CCGAGATGGC CGCGCTGCTC GACGAGGTCT CGCTCGAGGT CCACGACGTG
CCCGCGCTGG CAGATCTCAC CGCGGTGGAG CCGCCGTTTT CGCCGACCAT TCTGGGCCTG
TACCGGGGCC TGCCGCTGGG CCTGGAGCCG GCGCCCGGCG ACGACAGCGT GCCGCCGCGA
GCCGTCATCC TCTACCGCAA GAATCTCGCG CGCGCAGTGC GCAGCCGGGC CGAGCTCGAC
GCCCAGATCC GGCGCACGCT GCTGCACGAG CTGGGGCATC TGCAGGGCCT CGATGAGACC
GATCTGCGCC TGCGCGGCCT CGATTGA
|
|---|
| Protein sequence | MAAGRYIRFA LASVPAFGLG LALGLWWTRA PAAAPAGAEA SATANAAAIA GDGDSGGDSR
GNGGRDADSG ARALGNPPAR AEGAVELGER VPFANCELPI PALDGHPHDP PADSGAWAAD
ELDLVLDLAA DHYESGDYLT AYGCAELAAD VAPAAVDAHH LRASAAAALG YDEVARGAYA
MALALDPDDP ETLGAAADFY INVQNPKRRD TTMLGYEYAH RGRTQALARR RHMRPLRARL
TLLEAQALND LGVADQALLR VEETLRLEPA LSEAKYERAV SLLNLCRFED AARAFEAALA
LAPDDPYAHH HLGMVYEWLG REDDADSHQA IARSLAPEEF LPPVLLSSEA FHAELARAVA
ELPAEMAALL DEVSLEVHDV PALADLTAVE PPFSPTILGL YRGLPLGLEP APGDDSVPPR
AVILYRKNLA RAVRSRAELD AQIRRTLLHE LGHLQGLDET DLRLRGLD
|
|---|
| |