| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5657 |
|---|
| Symbol | |
|---|
| ID | 8548071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 7763522 |
|---|
| End bp | 7764298 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646390325 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003270027 |
|---|
| Protein GI | 262198818 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.893177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.229729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCTC CGGCCATCGC CGCCCGCGGC GTCGTCAAGC GCTATGGCGA CGCGGTCGCG
CTCGCCGGTG TCGACCTCCG CGTGGAGCGC GGGGAGATCG TCGGTCTGGT CGGCCCCAAC
GGCGCCGGCA AGACCACGCT GCTGCGCATC TTGAGCGGCT TTCTCGACCC CGACGAGGGC
GCCGTGGACA TCGCCGGCTA CGCCCTGGCT AGCGCGCGCC GGGCCGCGCA GGCCGCGCTC
GGCTATCTGC CCGAGGCCGT GCCCCTGTAC CGCGACATGC GCGTGGCCGC GCACCTGGAA
TTCGCCGCCA AGCTGGCCGG TGTGGACCGC GACATGATGG ACGAGCGCGT GGCCGAGGCG
CTGCGCGCGT GCGAGCTCGA GGACCAGCGC CAGCGCCTGG TCGGCCAGCT CTCCAAAGGC
TATCGCCAGC GCGTCGGCCT GGCCTGCGCG CTGGTCGCCG ATCCCGCGGT GCTCATCCTC
GACGAGCCCA GCGCCGGCCT CGATCCGGTG CAGACCCGCG GCCTGCGCGC GCTCCTGGAC
GCGCAGCGCG CGCGTCGCGG CGTGCTCATC GCCTCGCACG ATCTCGGCGA CATCGAGGCG
GTTTCCGACC GCGTGGTCGT ACTCGTGGGC GGACGCGTGG TCGGCGATGA CACCGCCGCC
GGGCTGCGCG AGCGTTTGGG CCTGGCCGCC GACAGCTCGC TCGACGAGGT GTTCCTGGTG
CTGAGCGGCG CGGCGGCCGA GGCCGCACCC GGAGCGGCGC GCGACGGAGG CGCGTGA
|
|---|
| Protein sequence | MSAPAIAARG VVKRYGDAVA LAGVDLRVER GEIVGLVGPN GAGKTTLLRI LSGFLDPDEG
AVDIAGYALA SARRAAQAAL GYLPEAVPLY RDMRVAAHLE FAAKLAGVDR DMMDERVAEA
LRACELEDQR QRLVGQLSKG YRQRVGLACA LVADPAVLIL DEPSAGLDPV QTRGLRALLD
AQRARRGVLI ASHDLGDIEA VSDRVVVLVG GRVVGDDTAA GLRERLGLAA DSSLDEVFLV
LSGAAAEAAP GAARDGGA
|
|---|
| |