Gene Hoch_5576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5576 
Symbol 
ID8547990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7656569 
End bp7657027 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content66% 
IMG OID646390249 
Productprotein of unknown function DUF1123 
Protein accessionYP_003269951 
Protein GI262198742 
COG category[S] Function unknown 
COG ID[COG5331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTGT CGCGGCACAC GATGGAAGCT CCCAGCCCGA TTCTCGCGCC CGTCATCGCC 
CTGGTCCTGT GGTCGGTGGT GATGTGGGTA TGGATGTACG CGACCCGGAT TCCCGCGATT
CAGCGCGCGA AGCTGGTCAT GGCGCCGGAG GATGACGGCG CCGCCGCCTT GCGCTCGCTG
CCCGCGCGGG TGCGCTGGAA GGCCGATAAT TACAACCACC TGATGGAGCA GCCGACCATC
TTTTACGCGG TCGCGCTGAC GCTGGCCCTG GTCGGCGCGG GCGATGGGAT CAACGCTCTG
CTGGCGTGGT CCTACGTGGC CCTGCGCGTG ATCCACAGCC TGATTCAGGC GCTGAGCAAC
ATCATCCTGC TGCGCTTCGC GGTCTTCGCG CTCGGCAACG TACCGCTCAT CTGGCTCAGC
TTTGCGGCCG CTTGGCAGGT GTTTGGCGGC GCTCACTAG
 
Protein sequence
MLLSRHTMEA PSPILAPVIA LVLWSVVMWV WMYATRIPAI QRAKLVMAPE DDGAAALRSL 
PARVRWKADN YNHLMEQPTI FYAVALTLAL VGAGDGINAL LAWSYVALRV IHSLIQALSN
IILLRFAVFA LGNVPLIWLS FAAAWQVFGG AH