Gene Hoch_5563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5563 
Symbol 
ID8547977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7635682 
End bp7637139 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content67% 
IMG OID646390236 
Producthypothetical protein 
Protein accessionYP_003269938 
Protein GI262198729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGA CGAAGAATAT AGAGGAAAAC TTGGTGGGGA CCGGTGCAAA ACCGATTGTA 
AGTTATGGAA ATTCGGCTTT TGAAGGCGAA GTGACAAATA AGCACAATGT GTCACCTTGT
CTCAAGGTGA AGCGTGGACA CCGGCGCTCG CTGCTCCCCC GTCGCGGCAA CACATCGTTT
GGTATGGCGC TGCTCAGCTC GCTGCTGATC ATCGCCTCGC TGGGCGCCTG TCATCTGGAC
GAAGCGCAAT CCAGCGCCTG GGATGTCGGC CAGGTGCAGC ACGAGATCCA GGCCGAGAAC
CGGCTGGCGC TCAACCGGCT GGCGCTCAAC CGGCTGGCGC TCAATCGCCT GGCGCTCAAT
CGCCTGGCGC TCAACGAGAT CTCCAGCGAC GATCTGGAGA TGGACCCGGC GCTCGACATC
TTGGCCACGG TCGAGGGGCG CGAGGTGCTG GCCTACGTGG TGCAGTGCGC GCTCGGCGAA
GACACCAGCC TCATCGCCGA GACCGCCGAT GGCAGCTTCG TCTTCCACGG CCTCTTGGGC
CTGGAGCCGG ACTGGGTCGA GGAGCCGCTC GATCTCGCCG GCCAGCGCAG CGTCTCGGCG
TGTCTGCTCG CGCGCGTCAA CGCCTTTGGC GAGTCGGTGC CGCTGTCGCT GCGCCTGCCC
GGCCGGCTGC CGAGCACGGC CCAGGAGCGC GCCAGCTACA AGGTCTACGA GGGCAGCTTC
TTCGGACAGG TGTTCGAGGA AGACGGCGGC GAGCAGAAAT TCTACGCCTG CCAGGGCAGC
ATCCCCGAGA CCAGCATGGC CAACAGCGCC ACGCGCCCAT TGCGCGTGTG CACCGACGAC
ACCAGCGGGT GTGAGATCGC GGTGGTCGGT CGCTGCCGCG ACGTATGCGA GACCCGCAGT
GACGACGCCG GCTGGCAGGA CTGCTGGGCC GAGGGCGTGC GCTACGAGGA CACCGTGAGC
GTCTACCTCG AGACCAGCAA CCCCGACAAC GCCAACTGGA CCTGCAGCTC CTGGTACTGC
CTGGCCTGGG CGTCGGAGGG GCGCGCGGCG ATCCTCGACT GCGGTCAGAA TTTCGACTGC
GACAGCGTCT GCCGCGACAA CGCGGTGTGC ACCATCGACG GCGCGTTCAC CGGCAACTTC
GGCGCCTACG TCACCAACGG CAGCATCGCC GAGATCGACT GCGCCGGCGC CGACGACTGC
GGGTTGCTGT GCGAAGGGGG CTCGACCTGC GACCTCGACT GCTCTGGTAT CGACGACTGC
CGCGCCACCT GCAAGGGCGG AGCGCTGTGC GAGATCACCT GCGAGGGCGA CGACTGCGAG
GAGATCGAGT GCATCGGCGG CGCCTCGTGC CTGCTGCACT GCAAGGCCGG CGATGACGAC
TGCGAGTTCG ATCGCTGCGC GGGCGGTCTC ACCGAGTGCC CGGGCAACGT CCTGGCCTGC
AACCGCGGCT GCCCCTGA
 
Protein sequence
MRATKNIEEN LVGTGAKPIV SYGNSAFEGE VTNKHNVSPC LKVKRGHRRS LLPRRGNTSF 
GMALLSSLLI IASLGACHLD EAQSSAWDVG QVQHEIQAEN RLALNRLALN RLALNRLALN
RLALNEISSD DLEMDPALDI LATVEGREVL AYVVQCALGE DTSLIAETAD GSFVFHGLLG
LEPDWVEEPL DLAGQRSVSA CLLARVNAFG ESVPLSLRLP GRLPSTAQER ASYKVYEGSF
FGQVFEEDGG EQKFYACQGS IPETSMANSA TRPLRVCTDD TSGCEIAVVG RCRDVCETRS
DDAGWQDCWA EGVRYEDTVS VYLETSNPDN ANWTCSSWYC LAWASEGRAA ILDCGQNFDC
DSVCRDNAVC TIDGAFTGNF GAYVTNGSIA EIDCAGADDC GLLCEGGSTC DLDCSGIDDC
RATCKGGALC EITCEGDDCE EIECIGGASC LLHCKAGDDD CEFDRCAGGL TECPGNVLAC
NRGCP