| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5553 |
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| Symbol | |
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| ID | 8547967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7620361 |
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| End bp | 7621482 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646390226 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003269928 |
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| Protein GI | 262198719 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGAG CGCTGCAGCC GTCCCTCTCG CACGAGCGTT TCATCCCGCA CGTGCTCGAG
CTGCTGAGCG AGCTGTTGCC GAGCGACATG GTCTCGTACA ACGAACTCGC GCTGCCGCCG
CACGGCTCCG AGCAGCCGCC CCAGACGGTA CAGGTCGTCT GGTCGCCCGC CGCGCCGAGC
GGCGGACTCA GCGTCGACGA CCAGCGCCGC ATTCTGAGCG CGCACCTTCG AGATCATCCC
GCGCAGCGTC CTCACAGCCA CTGCGTGGCG CGCAATCGCG ACCTACCCGG CGCAGCCACG
TGGTCGCGCT CCGAGCTGTA CAACCAGCTC TATCGCCCGC TGCGACTGCG CAAGCAGTGT
CACCTGTACG TCCCGCCGGC GCACCCCCGC AGCCTGATGG TATTGAGCTA CAGTCGCGAA
TGCGGCGCGT TCCACGATAA GGACGTGCGG CTGCTCGAGC GCGCGCAGGC GATCTTCGCC
GACGCCTTCC GCCAGCACTG GGCCCAGCGA GCCATGAGCG AGGAGCGGGC GCTGTGGCGG
TTGCTCGGCG AGTCGGACGA GCGCGGCTTG GTCCTCTTGT CCCAAAACGT GTCCGGGGGT
GAGCTGGGCG CGTATCGCTT GGATTGGGCA AACTCGCGCG CCCACGCGCT GCTGCGCGCC
ATCGGTCTGC CGCTGTCGGC CAGCGAGCTG CCCGCGCCGC TGCGCGCGTG GTTGCGCCCG
CTGGCCGCGG GTCGAGTGCC GACGCGGCCG CTGCGCCTGC GGGCAGACAG CGCCGAGTTG
AGCATCTCGT GCCACCGCTC GAGCGAGCAC GCATCTCAGC TCATGCTGTG CCTGCGCCAG
GCCAAGCTCG CCGCCACCGA GCTCGACGAG GCCGACGCCT ACCGCGCGAT CGCGGCCGCC
TACCCGCTCA CGGCGCGCGA GGCGCAGGTG GCCTGGTGGA TCTGCCAGGG CAAGAACAAC
CCCGACATCG CCACCATCCT CGGCATTCGC CCGGCCACGG TGAAGAAGCA CACCGAGCGC
ATCTACTTCA AGCTCGGAGT CGAGAACCGC ACCAGCCTGG CCAGCACCAT CCTGGCCCAT
CTCGACACCG GCCCGCAGCC GCGGACAGCG CTCGACGACT GA
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| Protein sequence | MAGALQPSLS HERFIPHVLE LLSELLPSDM VSYNELALPP HGSEQPPQTV QVVWSPAAPS
GGLSVDDQRR ILSAHLRDHP AQRPHSHCVA RNRDLPGAAT WSRSELYNQL YRPLRLRKQC
HLYVPPAHPR SLMVLSYSRE CGAFHDKDVR LLERAQAIFA DAFRQHWAQR AMSEERALWR
LLGESDERGL VLLSQNVSGG ELGAYRLDWA NSRAHALLRA IGLPLSASEL PAPLRAWLRP
LAAGRVPTRP LRLRADSAEL SISCHRSSEH ASQLMLCLRQ AKLAATELDE ADAYRAIAAA
YPLTAREAQV AWWICQGKNN PDIATILGIR PATVKKHTER IYFKLGVENR TSLASTILAH
LDTGPQPRTA LDD
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