Gene Hoch_5503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5503 
Symbol 
ID8547916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7548073 
End bp7548513 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content70% 
IMG OID646390176 
ProductRhodanese domain protein 
Protein accessionYP_003269879 
Protein GI262198670 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.734088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTC AACGCATCAC GCCCGACGAA GCCGCCTCCC TGCTCGAGCA GGGCTACACC 
TATGTGGACG TCCGCTCCGA GCCCGAGTTT GCCGAAGGGC ACCCGGAAGG CGCGTACAAC
GTGCCCTTCA TGCATCGCGA AGCCCGCAGC ATGGTGCCCA ACGCGGACTT CGCCCGGGTC
ATGCACGCCA ACTTCGCCAA AGACGCCAAG CTGGTGCTCG GCTGCCGCTC CGGGGCGCGC
TCGCTGCGCG CGGCCGAGAC CCTGAGCGCG CAGGGCTACA CCGAGGTCAT CGACATGCGC
GGCGGCTTCG CGGGCGAGGC CAACCGCACC GGCGAGATCG TCTGCGAGGG CTGGCAGTCG
CGCGGACTTC CGGTGTCGCG CGAGGCCGGC GAAGGGCGCG GCTACGAGGC CCTGGAGAGC
GCGACCCGCA GCCAGGAGTA G
 
Protein sequence
MAIQRITPDE AASLLEQGYT YVDVRSEPEF AEGHPEGAYN VPFMHREARS MVPNADFARV 
MHANFAKDAK LVLGCRSGAR SLRAAETLSA QGYTEVIDMR GGFAGEANRT GEIVCEGWQS
RGLPVSREAG EGRGYEALES ATRSQE