Gene Hoch_5483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5483 
Symbol 
ID8547896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7524034 
End bp7524729 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content73% 
IMG OID646390156 
Producthypothetical protein 
Protein accessionYP_003269859 
Protein GI262198650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.747945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTTC TGCTGCTGTG TCTGTCGCTG GTGTGCCTGC TGCTCGGGCC CGCGGCGGCG 
TATTTCGAGC TGGTGCCGGC GCTGTGGGGC TTCTACGGCT TCCTGGTGGG CGGTCTGTTG
GGCGCCCTGG CGTCGCTGGG CGCGCTGATC AATCTGCTGC GCAAGCGCGG CCGGCGCTCG
CTCGCGGTGC TGGTGCTCGG CCTGCTGCCG GTGGCCACGG TGCTGGCGCC CGCGCTGCAG
GCCGGCGAGC ATCCGCCGAT CAACGACATC TCCAGCGATC TCGAGGATCC GCCCGCGCTG
GCCAGCGGCG CCCCGTATCC CCCGGAGTTT GTGCCCATCG TGCGCGACAG CTACCCGGAG
GTGAGCACCC TGCGCGTGGC TGCCGCGCCC GCCGCCGTGT TCGACGCGGC GCGGGCATTG
GCCGCCGAGC GCGAGGGCTG GAGCGTGGCG CCAGCGGCCG GAGCCGATGA GGCTGCGGCC
GATTCTGGCG CGCGTTCGAG ATCGCTCCAG GGTGTGGCCA CGACCGCGCT GTTTCGCTTT
CGCGACGACT TCAGCATCCG CGTCCGCGGC ACCGAGGGCG GCAGCGCGGT CGACATGCGC
TCGCGCTCGC GCGATGGCAA GGGCGACCTG GGCGCCAACG CCGCGCGCAT TCGCGCGTTC
CTGCGCGATC TCGAGGCCGC GCTCGCGCGC CCTTGA
 
Protein sequence
MPFLLLCLSL VCLLLGPAAA YFELVPALWG FYGFLVGGLL GALASLGALI NLLRKRGRRS 
LAVLVLGLLP VATVLAPALQ AGEHPPINDI SSDLEDPPAL ASGAPYPPEF VPIVRDSYPE
VSTLRVAAAP AAVFDAARAL AAEREGWSVA PAAGADEAAA DSGARSRSLQ GVATTALFRF
RDDFSIRVRG TEGGSAVDMR SRSRDGKGDL GANAARIRAF LRDLEAALAR P