| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5439 |
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| Symbol | |
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| ID | 8547852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7463732 |
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| End bp | 7465513 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646390112 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003269815 |
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| Protein GI | 262198606 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.157729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTAG GCATGCTGTT CACCGGGGCG GCGCTGATCG CGCTGGCGTT CACCTGTGAG
GGCCCGAGCG CGCGCTCCAA GCCCTGGCGC CACGCCGAGC TCGACCTCGC CGAGGTCGCG
CCCTCCTCGG AGCTGATCGC GGCCGAGGCC GCGCGCGTGG CCTCGCGGCG GCGCCGCGGC
AGCACCCTGC GCATCCTGCT CGACGCCAAC CCGCGGCACC TCAACCCGCT GATCGCGCCG
ACCACGTGGA CCCGGCGCAT CGCCATGGAC ACGGTGTTCG AGAGCCTGGT GCGCTACGAG
CCGCCGAGCG GCGGCGCCGG CACCGGGCCC GGGCGCTACC GGCCCGGGCT GGCGCGCTCG
TGGACGCTGT CGCAGGGCGG GCGCGAGCTG CGCCTCGAGC TGAGCCCCGA GGTCACCTTC
CACGACGGCT CGCGCATGTC GTCGGTGGAC GTGCAGTTCT CGCTCGACAC CGCGCGCTCG
CCCAAGTACG CGGCCGATCA CCTGCGGCCC ATGCTGGCCG ATGTCCTGGC GGTCGAGATC
CTCGGCCCGC GCACGGTGCG CGTGCGTCTG TCCCGGCCCA ACGGCTACGT GCTGCGCGCC
CTGGCCGAGA TCCCCATCCT GCCCGCCCAG GTGTACGAAA AACGCCTGCG GGCGGCGCGC
GGACCCGTGG TCGGCACCGG CCCGTATCGA CTCGAGAGCT GGGACGACGA GCTGATACGG
CTCGAGCGCT CTGACAGCTA TTGGGGCGCG GCCCCGGCCA TCCCGCGCAT TGAATTCGTC
CACCAGCCCG ACGACGCCCG CGCGCTCACC GAGGCCAAGC GCGGCGAGCT CGACATCGTG
CCGGCCCTGA TCCCGTCGCA CTATCCCGAG CAGGCCTCGG CGCCCGGGCT GGCGCGCGTG
TTCCGGCCGC TGCGCCTGCG CCCGCCGGCG CTGCGCTACA TGGTCATGAA CACGGCCAAC
CCGGCCCTGA GCGACGTGCG CGTGCGCCAG GCGTTGGCGC TGCTGATCGA CCGCAAGGCG
CTGATCAAGA GCGAGCACGA CGGCCTGGCG CGAGCCGTGG CCGGCTTCGT GTGGCCCGGC
GGCCCCGGTG ACGGACCGGC GCCGAGCCCG CCCGACTACG ATCCTGCGCG CGCCGGTGCC
CTGCTCGACG CCGCGGGCTG GCGCGATCGC GACGGCGACG GCGTGCGCGA GCTGGGCGAG
GACAAGCTGC GGCTCACGCT GCTGGTCACC GACAGCGGCG AGCCCAGCGA CGACGACGAC
GCCGAGGAGG CCCGCGACCG CGGCGAGCGC GAGCGTATCG TGCGCAGCCT GCGCCGCTCG
GGCGTGCAGA TCGACCGCCG CGTGGGGCCG CCCGCCGTGC TGCGCAACCG CCTGCGCGCG
GGCGACTTCG ACCTGGCCTT CGCGCACTGG CGCGGCCTGG TCGACGACGA CCTGGCGCCG
CTGCTCGAGA GCGGCTCATC GCTCAACCTC GGCGGCTTCT CGAGCCCGCG GGTCGACGCT
GTGCTCGCCG CTCTGCGCGC GGCCTGGGAG CCGGGCGCGC GGGCGCCGCG CATGGCCGAG
CTGGCCCAGG TGCTGGGTGA GACCTGGCCG GTGGCTGCGA TCGTCGCCCC CGATCCCTAC
GGGCTCATCC ACCGCCGCGT GCGCGGCGCC GTGGTGTGGA ATGGCTGGCT GGTGCTGCGC
TCGCTGTCGC TCGACCCCGA TCGCGACGAC GAAGGCGAAG CCGCGGGCGC AGCCGCGGGC
GCTGGCTCGG GCGCCGCGGA CCCGAGCGGC GAGGCGCCAT AG
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| Protein sequence | MLLGMLFTGA ALIALAFTCE GPSARSKPWR HAELDLAEVA PSSELIAAEA ARVASRRRRG
STLRILLDAN PRHLNPLIAP TTWTRRIAMD TVFESLVRYE PPSGGAGTGP GRYRPGLARS
WTLSQGGREL RLELSPEVTF HDGSRMSSVD VQFSLDTARS PKYAADHLRP MLADVLAVEI
LGPRTVRVRL SRPNGYVLRA LAEIPILPAQ VYEKRLRAAR GPVVGTGPYR LESWDDELIR
LERSDSYWGA APAIPRIEFV HQPDDARALT EAKRGELDIV PALIPSHYPE QASAPGLARV
FRPLRLRPPA LRYMVMNTAN PALSDVRVRQ ALALLIDRKA LIKSEHDGLA RAVAGFVWPG
GPGDGPAPSP PDYDPARAGA LLDAAGWRDR DGDGVRELGE DKLRLTLLVT DSGEPSDDDD
AEEARDRGER ERIVRSLRRS GVQIDRRVGP PAVLRNRLRA GDFDLAFAHW RGLVDDDLAP
LLESGSSLNL GGFSSPRVDA VLAALRAAWE PGARAPRMAE LAQVLGETWP VAAIVAPDPY
GLIHRRVRGA VVWNGWLVLR SLSLDPDRDD EGEAAGAAAG AGSGAADPSG EAP
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