| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5423 |
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| Symbol | |
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| ID | 8547835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7448472 |
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| End bp | 7449197 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646390096 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003269800 |
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| Protein GI | 262198591 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0355329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACCG CATTTATCGC CGGAGCCACC GGGTACACGG GGCGCGAGGT GGCGCGCCAG
CTCGCGACTT CGGACATGCG TCCCATCGCT CATGTGCGCC CCGATTCCTC GCGTCTCGAG
GCGTGGCGCG CGCACTTTGG CGAGCTCGGC GTCGAGGTCG ACAGCACGCC CTGGCGGCGC
GAGGAGATGT CGGCGCGTCT GAGCGAGCTG CGCCCGACGC TGGTGTTCGC GCTGCTGGGC
ACGACCCGCA AGCGCGAGAA GCGCGCGGCC GCGGGCGGCA CCGACGCCTC GTACGAGGCC
GTGGACTACG GTCTGACCAA GCTGCTCATG GACAGCGCCG GCGACGCGGC CGAGGCGACC
GGTGTGCGGC CGCGCTTTGT GTATCTGTCG TCGATGGGCG TGAGCGAGCG CGCCCGCGGC
GCGTATCTGC AGGTGCGCTG GCGGGCCGAG GAGGCGCTGC GCGCCAGCGG TCTGCCCTTC
GTCATCGCCC GGCCCTCGTT CATCACCGGC CGGGATCGCG ACGAGGCGCG GCCCGGCGAG
CGCATCGGCG CGGCCGTGAG CGATGGCGTG CTGCGGGTGG CCGGGATGCT GGGGCAGCGC
AAGCTGCGCG AGCGCTATCG TTCGACTGAC GCGGCCACCC TGGCGCGGGC GCTCATCGCC
CACGGTCGCG CGCCGGACAG CGCCGGCCGG GTACTTTCTT CGGACGAGCT GCGCGCTGCG
CCGTGA
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| Protein sequence | METAFIAGAT GYTGREVARQ LATSDMRPIA HVRPDSSRLE AWRAHFGELG VEVDSTPWRR
EEMSARLSEL RPTLVFALLG TTRKREKRAA AGGTDASYEA VDYGLTKLLM DSAGDAAEAT
GVRPRFVYLS SMGVSERARG AYLQVRWRAE EALRASGLPF VIARPSFITG RDRDEARPGE
RIGAAVSDGV LRVAGMLGQR KLRERYRSTD AATLARALIA HGRAPDSAGR VLSSDELRAA
P
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