Gene Hoch_5398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5398 
Symbol 
ID8547810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7417248 
End bp7417784 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content69% 
IMG OID646390071 
Producthypothetical protein 
Protein accessionYP_003269775 
Protein GI262198566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0866702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.512855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCACG GACGCGACCG GGCGTATCGT CGCCTCTACG AGCCGCTCAG CACGCTCAAG 
CCGGTGGCCG AGGGCGTTTG TGACGCCATC TGGATCGTCG ACGGGCCGGT GGTGCGGATG
TCGTTTCCGC TGGGATTGCA GGTTCCCTTT CCCACCCGTA CGACAGTCGT ACGACTGTCC
GACGGCGGCT TGTGGGTCCA TTCGCCCGGC GCGCTGCCGC CGAGCTTGGC GCGCGAGGTG
GTGTTCTTTC ACCGCGCCTC GCGCACGCTC ATCCTCACCG ACCTCATCGA GAACTTCGAG
GTCGACACCC TGCGCTGGCC GTGGAGCTGG CTGATGCGCT TGAGCGGCGC GATGCACCCC
GACGGCAAGG CGCCCGTGGA CATGCGCAAG ACCTTCCGCA AGGGTCGCGA GGCGGCGCGC
GCGTCGCTGG CGCGGATGCT CGCGTGGCAG CCCGAGCGCG TGGTGATCAG CCACGGCACG
TGGTACCAGA GCCACGGCAC CGCCGAGCTC GAGCGCGCCT TTCGCTGGCT GCGCTGA
 
Protein sequence
MSHGRDRAYR RLYEPLSTLK PVAEGVCDAI WIVDGPVVRM SFPLGLQVPF PTRTTVVRLS 
DGGLWVHSPG ALPPSLAREV VFFHRASRTL ILTDLIENFE VDTLRWPWSW LMRLSGAMHP
DGKAPVDMRK TFRKGREAAR ASLARMLAWQ PERVVISHGT WYQSHGTAEL ERAFRWLR