| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5341 |
|---|
| Symbol | |
|---|
| ID | 8547753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7347435 |
|---|
| End bp | 7348241 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646390014 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_003269718 |
|---|
| Protein GI | 262198509 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.612653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCT GCTGCACGGA TGTCGACACG CTGTTACAGA CTTACCTGGA CGACGAGCTC
GCCGAGGGCG AATCTCGCGA GTTCGAGGCG CATCTCGGGG TCTGCGGCAC ATGCCGCGGA
CGAACCGCCT CGGCCGCGCG CTTTCGCGAC GTCATACGCG ACAAGCTGCA GCCGCCGCGA
GCGCCCGAGG ACCTGCGCGA ACGCGTCGCG CTGGCGCTCG ACCGCGAGGA ATGGCGCATG
CGCCGCTCGC GCCGCGGCTG GGTGCTCCCG GGCGCGGCCA CGGTAGCCGC CGCCGCCGCG
ATGCTGCTGT TCATCGTGAC CTCGCTGCCC ATCTCCGGCA GCGCCTCCCC GGTGGCCGAC
GACGCCGTGC TCCAGCACAT GCGCCGGCAG GCCATCGAGG TCCAGGGCGC GGCCGTCTCG
CCCTGGGAGC GCACGCAGTC GAGCGGCGAG ATGCGGATGC CGCAATTCCG CGGCGTGCGC
GCCAAGGTCA AAGGCGCTCG CATCAGCGAG CTGCGCGGCC GTCCGGCGCT GCAGATCTTC
TACAAGGTCA TGCACGGCCA GCGCCCCTAC GAGGTCGCCC TGCAGGTCTT CGACGCCCAG
GACGTGGACT TCGGCAGCGG CTTCCCGGGC AGCGAGCTGC GGGTCGCGAA CAACCGCGAG
CTGTGGGTCG GCGAGCTGCG CGGCTACACC GTGGTCGCCC ACCGCGACGC CGAGGGCACC
GGCTACATGT TCACCTCGGC CGACTACCCA GCCGAAGACC TCGCCAGCTT GGTCGCCGAA
GCCGACCTGC CCCCGCCCCT GCCCTGA
|
|---|
| Protein sequence | MPICCTDVDT LLQTYLDDEL AEGESREFEA HLGVCGTCRG RTASAARFRD VIRDKLQPPR
APEDLRERVA LALDREEWRM RRSRRGWVLP GAATVAAAAA MLLFIVTSLP ISGSASPVAD
DAVLQHMRRQ AIEVQGAAVS PWERTQSSGE MRMPQFRGVR AKVKGARISE LRGRPALQIF
YKVMHGQRPY EVALQVFDAQ DVDFGSGFPG SELRVANNRE LWVGELRGYT VVAHRDAEGT
GYMFTSADYP AEDLASLVAE ADLPPPLP
|
|---|
| |