| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5271 |
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| Symbol | |
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| ID | 8547683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7249017 |
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| End bp | 7250123 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646389945 |
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| Product | peptidase M20 |
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| Protein accession | YP_003269649 |
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| Protein GI | 262198440 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCGT CTGCCGTCCC CGAGCAGGCG CTGCGCGACA CCCTGCTGGC GCTCACGGCC
ATCGCCAGCC CCATCGGCGA GGAGCAGGCG CTGTGCGACG CGGTCGAGCG CCGGCTGCGC
GCCAGCCTGG GCGAGGCCGC GGTGACGCGT CATGAGCACA GCCTGGTGGT GCACGCGGCG
CCGCGTCCCG GGCTGCCGCG CATCGGCCTC ATCGGCCACC TCGACACCGT GCGCACCGAA
CACGACGGAC CCGCGCGCAT CGACGGCGAG CGGCTCTACG GCGCCGGTGC GGCCGATATG
AAATCCGGCC TGGCGGTGAT GATCGAGCTC AGCGAGCGGC TCGAGCGCGC GTCCTTGCCC
TGCGACCTCA CCCTGGTGTT CTACGAGCGC GAGGAGGGGC CCTTCGAGGA GAACATGCTG
GGCCCGCTGC TCGAGCGCTT CGACGCCCTG CGCCAGCTCG ACCTGGCCAT CTGCCTCGAG
CCCAGCGACA ACAAGCTGCA GCTCGGCTGC ATGGGCTCGG TGCACGCCAC CGTGCGCTTT
CTCGGACGCA CGTCCCACAG CGCCCGGCCG TGGCAGGGCG AGAACGCCAT CACCGGCGCG
GCCGACTTCC TGGCCCTGCT GCGCGACCGC GCGCCCAACG ATGTCGTGCT CGACGGCCAC
CACTTCCGCG AGGTGGTGTC GCCGACCATG GCCAGCGGCG GCCGCGGTCG CAACATCATC
CCCGACAGCT TCGAGATCAA CGTCAACTAC CGCTTCGCCC CCGGGCGCAC GCCCGAGCAG
GTGGTCGACG AGCTGCGCGC GCTGGTGCGC GAGTGCGCGG GCGATCGCGC CGAGCTCGTG
CCCACCGATC TCAGCCCGGC CGGGCGTCCG CACGCCAGCC ATCCGCTGGT CCTGCACCTG
CGCGACTGCG GCGTGAGCGC GCTCGAGACC AAGCAGGCGT GGACCGATGT GGCCCGCTTC
GACGCCGCCG GCGTGCCGGC CGTCAACTTC GGGCCCGGCA CCCAGGCCCA GGCCCATCAG
CGCAACGAAT ACACCGAGCT GCCGCCGCTC TACGCCGGCT ACGCCATCCT CGAGCGCTTC
CTCAGCAGCG TGCCGGCGCC CGCCTGA
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| Protein sequence | MSASAVPEQA LRDTLLALTA IASPIGEEQA LCDAVERRLR ASLGEAAVTR HEHSLVVHAA
PRPGLPRIGL IGHLDTVRTE HDGPARIDGE RLYGAGAADM KSGLAVMIEL SERLERASLP
CDLTLVFYER EEGPFEENML GPLLERFDAL RQLDLAICLE PSDNKLQLGC MGSVHATVRF
LGRTSHSARP WQGENAITGA ADFLALLRDR APNDVVLDGH HFREVVSPTM ASGGRGRNII
PDSFEINVNY RFAPGRTPEQ VVDELRALVR ECAGDRAELV PTDLSPAGRP HASHPLVLHL
RDCGVSALET KQAWTDVARF DAAGVPAVNF GPGTQAQAHQ RNEYTELPPL YAGYAILERF
LSSVPAPA
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