Gene Hoch_5243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5243 
Symbol 
ID8547655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7205462 
End bp7206196 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content72% 
IMG OID646389917 
Producthypothetical protein 
Protein accessionYP_003269621 
Protein GI262198412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.197131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG ACACCCACTC TGACCAGGCG CTGCTCGAAT CGGCGCTGAA CGCGCTTCCT 
GCCAGCGCCG AAGCCGAACT CGGCGCCCAG GCGCTGCGCG TCTACGAGCG CTACGCCACC
GAGATCGTCG AGGCCTTTAA TCTCTGCCCC TGGGCCCGGC GCGCGCGCCA GACCGGGCGG
GTGCGGCCGC ATGTTTTGCT GGCGCCTCAG CCCAGCGCGG CCGAGGTCGT CGTCCAGGTG
GACGAAGTCT TTTCCGACCC GGCGATCGAG ATCGGCCTGA TGATCTTCCC GCGGCTGTCG
CTGAGCCGGC TGGCCTTTCA CCGCTTCGTG TCCGATGTGC GCCAGGTGAG CGAGGACGGG
CATCGCCTGA GCGGCGCTGC CGGGCCGCCG CCGCTGGCCA TGGCCGGCTT TCACCCCGCG
GCCGAGCCCG ATCTCGGCAG CCCGGCGCGG CTGGTGTCGT TTCTTCGGCG CACGCCGGAT
CCGACCATCC AGGTGGTGCG CTCGAGCGTT CTGGCCGCGG TGCAGGGGCC GCCCACGGGC
AGCGTGTACG CGCCCGATGC CATGCTGCGG CCCGATCTCC TGGTGGTCGA GAAGCCCATG
CACCAGCGCG TGGCCGAGGC CAACCTGGCC ACGGTCGAGC GCGTCGGCGT CGCCGAGCTG
CGCGCCCGGC TCGACGACAT CCGCCGCGAC CGCCAGCGCA GCTACGCCGA GCTGGCGCAG
CGCGCGCAGG GCTGA
 
Protein sequence
MTRDTHSDQA LLESALNALP ASAEAELGAQ ALRVYERYAT EIVEAFNLCP WARRARQTGR 
VRPHVLLAPQ PSAAEVVVQV DEVFSDPAIE IGLMIFPRLS LSRLAFHRFV SDVRQVSEDG
HRLSGAAGPP PLAMAGFHPA AEPDLGSPAR LVSFLRRTPD PTIQVVRSSV LAAVQGPPTG
SVYAPDAMLR PDLLVVEKPM HQRVAEANLA TVERVGVAEL RARLDDIRRD RQRSYAELAQ
RAQG