| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5156 |
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| Symbol | |
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| ID | 8547567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7102282 |
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| End bp | 7104177 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646389832 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003269537 |
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| Protein GI | 262198328 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.794447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA CGAAAGGCAC GACTATGCAA TCGCCTCACC TGCTCCGGCC CGGCCATCGC
GCCGCGTCCA TGTATCCGCC CGCGCGTCCG GTTTCCGCTC CGGCTACGCG CGCTCGGTCC
CCGCGGCTGA CCCGCGCGGC GGCCGCGCTG CTGGCGCTGC TGGGCCTCGG CGCCTGCGGC
GGGGCGCCCG CGACCCAGCA GCCCTCCGAG CCCGGCGAGC CGCCCGTAGC GAGCGAGCCG
GACGCCCGTC CGGGAAGCTT CGCCGACAAC CCGCTGGTGT ACTTCGTCAT CACCGATCGT
TTTTTCGACG GCAACGCCGA AAACAACCAC TCATACGGCC GCAAAGGCGA CGGTGGCGAC
GAGATCGGCA CCTTCCACGG CGGCGACCTG GCCGGGCTCA CGACGAAACT CGAAGAGGGC
TACTTCCGCG CTCTCGGCGT CAACGCCATC TGGATCACGG CGCCCTACGA GCAGATCCGC
GGCTGGGTAG TCGGCGGCGA CAAGGCGTTT CAGCACTACT CGTACCACGG CTACTACACC
CTGGATTACA CTGTGCTCGA CCAGAACATG GGCACGCCCG ACGAGCTGCG GCGCTTCGTC
GACACCGCGC ACGAGCAGGA CATCCGCGTC ATCTTCGACG TGGTCATGAA CCACCCCGGC
TACGCCGATC TGCAGACCCT CGACGCCTTT GACATCGAGG TGCTGTGGGA GGGCTGGGAA
TCCGCCACCC TGTCCGATTA TCACAGCTAC ATCGACTACA ACAATTTCGC CTTTACCGAG
TGGTGGGGGC CGGACTGGAT CCGCGCGGGC TTGCCCGGCT ACCAGGAGGG CAACAGCACC
GACGACCTGA CCATGCAGCT CGCCTACCTG CCCGACTTCA AGACCGAGTC CGAGCAGCCG
GTGGGCCTGC CGCCCTTCCT CACCCGCAAG GCCGACACCA AGGCCGTGGC CGTGGACGGC
TACACCGTGC GCGACTACCT GGTCGCGTGG CTCAGCGCCT GGGTGCGCGA GTACGGCATC
GACGGGTTCC GCTGCGACAC CGCCAAGCAC GTCGAGCTGG CGGCCTGGTC CGAGCTCAAG
CAGGCGGGCA CCGAGGCGCT GGCGGCGTGG AAGCAGGACA ACCCGGGCAA GGCCATCGAC
GACGCGCCCT TCTGGATGAC CGGCGAGGTC TTTCCCCACG GCGTGGTGCG CGACGCGTAT
TTCGACCAGG GCGGCTTCGA CAACCTGATC AACTTCGACT TTCAGAACCA GCTCGGCGAC
ATCCTGCGCG GCCCCGCGAG CGAGCGCTGG CAGCGCCTCG ACGACCTGTA CGCCGACTAC
GCCGCGCAGA TCAGCGACGA CGCCAGCTTC AACGTGCTGA GCTACATCTC CTCGCACGAC
ACCAAGCTCT TCGATCGCGA GGCCCTGGTG GCGGCCGGTA CCGCGCTGCT GCTGGCCCCG
GGCGGCGTGC AGATCTTCTA CGGCGACGAG AGCGCGCGGC CGCTCGGTCC CAGCGTGAGC
AGCGATCCGC AGCAGAACAC GCGCTCGGAC ATGAACTGGG ACGCGCTGGC CGACGATGTG
CTCGCGCACT GGCAGACCCT GGGCCGCTTC CGCCGCCGCC ACGTGGCCCT GGCCAAAGGC
ACGCATCAGA AGCTCGGCGA CGCGCCGTAT GTGTTCGCGC GCAGCCGCGA CGACGACGCC
GTGGTGGTCG CCCTGCTCGG CCAGCTCGGC GAGGCCGGCG CAGATGCGAG CGAGACCGTG
CGCGTCCCGG TCGGCGACGT GTTCCCGGTG GGCACGCGCC TGCGCGACGC GGCCACGGGC
GCCCCGCTCG AGGTCGAGAC CGACGCCAGC GGCGGCGCGG TCGCGCTCAC GCCGGGCGCC
AGCGGCGTGG TCCTGCTCGA GCGCGTCGCG CCCTGA
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| Protein sequence | MNATKGTTMQ SPHLLRPGHR AASMYPPARP VSAPATRARS PRLTRAAAAL LALLGLGACG
GAPATQQPSE PGEPPVASEP DARPGSFADN PLVYFVITDR FFDGNAENNH SYGRKGDGGD
EIGTFHGGDL AGLTTKLEEG YFRALGVNAI WITAPYEQIR GWVVGGDKAF QHYSYHGYYT
LDYTVLDQNM GTPDELRRFV DTAHEQDIRV IFDVVMNHPG YADLQTLDAF DIEVLWEGWE
SATLSDYHSY IDYNNFAFTE WWGPDWIRAG LPGYQEGNST DDLTMQLAYL PDFKTESEQP
VGLPPFLTRK ADTKAVAVDG YTVRDYLVAW LSAWVREYGI DGFRCDTAKH VELAAWSELK
QAGTEALAAW KQDNPGKAID DAPFWMTGEV FPHGVVRDAY FDQGGFDNLI NFDFQNQLGD
ILRGPASERW QRLDDLYADY AAQISDDASF NVLSYISSHD TKLFDREALV AAGTALLLAP
GGVQIFYGDE SARPLGPSVS SDPQQNTRSD MNWDALADDV LAHWQTLGRF RRRHVALAKG
THQKLGDAPY VFARSRDDDA VVVALLGQLG EAGADASETV RVPVGDVFPV GTRLRDAATG
APLEVETDAS GGAVALTPGA SGVVLLERVA P
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