| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5152 |
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| Symbol | |
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| ID | 8547563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7096269 |
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| End bp | 7097519 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646389828 |
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| Product | porin LamB type |
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| Protein accession | YP_003269533 |
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| Protein GI | 262198324 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.430452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACGT CTGAAAGCAC TGCCCGGCGC CTGCGGCGTC AGGTGATGGG GGTCGCGGTT
TTGAGCGCCT CCGTTCTCGT CCCCACTGCG GCCTTTGCGC AGGAGGAAAA GCCGGTTTTC
GAATACCACG GCTACCTGCG CTCCGGCGCT GGCTTCAGCC TCGACGGCGG CGAGCAGGTC
GCGTTTCAGG CGCCGGGTGC CTATGCCAAG TACCGCCTGG GCAACGAGAC CGAGACCTAC
GGCGAGCTCG GCCTGACCGG CAACTGGCTC GGCAACGAGG GCGACGGCGC CTGGTTCCGC
ACCGAGATCA AGCTGGCGGT CATCACCGGC AACGTCCAGC AGTTCGACAG CCTCAAGGCG
GACACCAGCA ACATCGCCAT CCAGGAGAGC TACGCCGAGG CCGGCAACCT GTTCGCCGAC
CAGCCGGGCA TGAGCTTCTG GGCCGGTCAC CGCTTCTATC GCCGCCACGA CGTTCATATC
AATGACTTCT TCTACTGGGA TATGAGCGGC TACGGCGCCG GCTTCCAGGA TATGGACCTC
GACTTCGGCA AGCTGGCGGT CGCCTACCTG GCCACCGAGG GAGCCGACCG CTCGGTCAAA
AACCACATCG ACATCCGCCT CTACGACCTG CCGGCGGGTC CGGGCACGCT CACCGTCGGT
GTCGCGCCGG TGCTGCAGAC CGCCGGCGAC AGCGGCGGCG ACAGCACCTT TGGCGTCGCC
GGCACCGTGA TGCACACCAT GGGCGGCTTC ATGGGCGGCT TCAACAAGCT CTCCCTGCAG
GTTGGTTATG GTGCGCAGGC CGGACTTCTC ACCTATTTCG GTGGCGCCGA GGACGGCCTG
ATGATCCGCC TGGTCGAGCA GGCGCAGATC CAGACCAGCG AGGCGTTCTC GATGATGTGG
AGCGGCATCG CCCAGTTCGA CGACGCCGAC GGCGATGACG ACATGAACAT GTGGATCTCG
CTCGGCGCTC GCCCCACCTT CCATCTCAGC AAGTACACGG CCCTGCTCGC CGAGGCCGGC
GTGGACATCG TCCAGCCCGG CGCCGAGGGC TCGGAGCTCG GCTTCCTCGG CAAGCTCACG
GTCGCCCCCA CGCTCAAGGC CGGCAACGGT TTCTGGGGTC GCCCGGAGCT CCGCGCCTTC
GCCACCGCCG CGTTCTGGAA CGAGGCCATC CAGGGTCAGG TCGGCGGCGC CGCGTTTGCC
GACGACACCT TCGGCATGAC CTTCGGCGTC CAGGCCGAGA GCTGGTGGTA A
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| Protein sequence | MHTSESTARR LRRQVMGVAV LSASVLVPTA AFAQEEKPVF EYHGYLRSGA GFSLDGGEQV
AFQAPGAYAK YRLGNETETY GELGLTGNWL GNEGDGAWFR TEIKLAVITG NVQQFDSLKA
DTSNIAIQES YAEAGNLFAD QPGMSFWAGH RFYRRHDVHI NDFFYWDMSG YGAGFQDMDL
DFGKLAVAYL ATEGADRSVK NHIDIRLYDL PAGPGTLTVG VAPVLQTAGD SGGDSTFGVA
GTVMHTMGGF MGGFNKLSLQ VGYGAQAGLL TYFGGAEDGL MIRLVEQAQI QTSEAFSMMW
SGIAQFDDAD GDDDMNMWIS LGARPTFHLS KYTALLAEAG VDIVQPGAEG SELGFLGKLT
VAPTLKAGNG FWGRPELRAF ATAAFWNEAI QGQVGGAAFA DDTFGMTFGV QAESWW
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