| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5141 |
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| Symbol | |
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| ID | 8547552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7081964 |
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| End bp | 7082758 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646389817 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003269522 |
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| Protein GI | 262198313 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.11531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCACCG AGCGCACCAT CCGGCTGGTG CTCGAGTACG ACGGCACCGG GCTGTCCGGC
TGGCAGCGCC AGAACAACGC GCCCACGGTC CAGGCCCACG TCGAAGACGC GCTCTCGTCC
ATGCTCGGAC GCGCGGTCCA GATCGTCGGC GCCTCGCGCA CCGACGCCGG CGTCCACGCC
CTCGGCCAGG TCGCCCACTT CCGCACCGGC AGCAGCATCC CGCCGCACGG CTTCTTGCGC
GGCCTCAACG GCAAGCTGCC GCCCGCCATC GCGGTGGTCG CCTGCGCCGA GGTCCGCGCC
GACTTCCACG CCCGCTTCGA CTCGCGCGGC AAGCACTACC GCTACGCGCT GCACACCCGC
GCCGCGCGCG CGCCCCTGCT GCGCGAGCGC GCCTGGCACT GCCCGCGCCC GCTCGACCTC
GCGGCCATGG AGCGCGCCGC CCAGGCCATG CTGGGCGAGC GCGACTTCCA GGCCTTCCGC
GCCTCCGGCT GCACGGCCAA GACCTCGCGC CGCCGCGTCG ACCGCGTTGC GTTGAGCCGC
CCGGCGGCCG ACCTCATCCA TATCGACGTC TACGGCAACG CCTTTTTGCG CAACATGGTC
CGCATCATGG CCGGCACGCT GGTCGACGTC GGCCTGGGCC GTCTGGCCGC CGACGAGATC
TCATCGATCC TCGACTCCAG GGACCGCACC TGTGCAGGGC GTACAGCTCC GGCTCACGGC
CTCACCTTGG TCGAGGTGTT CTATCCCGCA GAGACGCCGA GTACGACCAC TGTACCGCCC
TCCCCCCAGG GGTGA
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| Protein sequence | MSTERTIRLV LEYDGTGLSG WQRQNNAPTV QAHVEDALSS MLGRAVQIVG ASRTDAGVHA
LGQVAHFRTG SSIPPHGFLR GLNGKLPPAI AVVACAEVRA DFHARFDSRG KHYRYALHTR
AARAPLLRER AWHCPRPLDL AAMERAAQAM LGERDFQAFR ASGCTAKTSR RRVDRVALSR
PAADLIHIDV YGNAFLRNMV RIMAGTLVDV GLGRLAADEI SSILDSRDRT CAGRTAPAHG
LTLVEVFYPA ETPSTTTVPP SPQG
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