| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5137 |
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| Symbol | |
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| ID | 8547548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7075721 |
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| End bp | 7077970 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646389813 |
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| Product | Exodeoxyribonuclease V |
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| Protein accession | YP_003269518 |
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| Protein GI | 262198309 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit
[TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.34484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT CCTGGTTACA GATCTCGCCG CGGGGCACCG CGCGCGAGCG CTACGAGCAG
CGCGTGGGTC TGGCGCCGCT GGCGTCGGCC GCGGCTGCCG AGACGAGTGC CGATAGCGAC
GCCGCCGCAG CGAGCGAAGC CGAGCGCGAC GCCGGCGAGC GCGAGCGCCT GGCGAGCTTC
TTCCGCAATG TCGCCGCGGG CGCCCACGCC CACGATCTCG GCGACGAGAG CCTGTATCTG
GCCGAGGAGC TGGCCGAGCT GCAGTGGTCG CTGGCCGGCC GTCACAAACG GGCGGTGGCG
CTGCTCGCGC TGGCGACCAT GATCAGCGCG CGCCAGGGCT CCAGCCGGCT GCCCATCGAC
CTCGCCCCCG ACGGCTATCT CGCGCGCCTG CTGGGCTCGC TGCTCAGCGC CGGCGAGATG
CAGCTCGCGC CCGCCGAGGT GCTGCGCGAT ATCGAGGCCC TGCCGCGGCT GCCCGCGCTC
GACAAGGTGA TCGGACGACC GGGCGAATAC CGGCCGCTGA TCTTCAGCGA CGGCTGCATC
TACCAGCACC GCATGCTGTG GTGCGAGGAC CAGCTCGCCG CGCGGCTGCG CGAACGGCTG
GGCGGCGCGC GCGACGACAC ATCGATGGCC GGCCGGGCGG CGCCCAGGAC GACAGCGGGG
ACAGCAGCCG GCGCGGCGGG CGACAGCGCG GGCGCGGTGG CCGGCGACGC AGCGAGCGAG
GACGCGGCGT CGGCCGCGCT CGCGGCCGTG CTCGCCCGCC CGGCCATGGT CGGCGCGGAT
GCCGTCGTGC TGTCCGACGA ACAGGCGGCC GCGGTGCGCG CGGCCACCCG GCAGCGCTTC
TGCGTCATCT CCGGCGGCCC CGGCACCGGC AAGACCGCCA TCGTGGTGAC CATCCTGCGC
ACCCTCGCGC GTCTGGGCGA ATCGCCCGAG AGCGCGCTCC TGGCCGCGCC CACGGGCAAA
GCCGCCAACC GCATGGGCAG CTCGATCCGC TCGGCGCTGC TGGCGGTGCC CGACCCCGAC
CCGGTCGATC GCCAGCTCCT CGAGCGCGCC AGCGAGCCGC AGACCCTGCA CCGCCTGCTC
GGCTACGTGC CGGTCCTCGA TCGCTTTCGC CAGCACGAGA ACAACCCGCT GCGGGCGCGC
ACGGTCATCG TCGACGAGGC GTCCATGATC GACGCCGAGT TGATGGAGCG CCTGCTGCGC
GCGGTGCCGT CCGAGACCCG CCTGGTGCTG CTCGGCGACG CCGACCAGTT GCCCTCGGTC
GACGCCGGCG CGGTGCTGCG CGATCTGGTC GCCGCGGGCA CGGGTGACGA CGGCGGCTTT
GCCCGCAGGC TCACCCACAG CTATCGCATG GACGTGCGCG ACCCCGCCGG CCGCGCCATC
CTCGGCGCCG CCCAGGCCAT GAACCGCGGC GAGACCGCGC TGGCCCTGCC CATCCGACGC
GCGGCCAAGG AGCTACAGTG GCACGGCATC GAGCTGCTCG ATACCGTCGG CGCCACCGGC
GCCACCGAGG GCACGACAGC CCCCGCCGCC GACATCGCCG CGGTCAACGA CTTTGTCGAC
CACTGGTACG ACAAACGCAT CGCCAGCGAC CGCGAATTCG CGCGCCTCAG CACCAAGACC
TTCCAGCGCC ACGACGACGC CTTTACACCC GAGGACGCCG CCGATCTGCG CGCGCTGATG
AGTATCTACG AGCGCAGCCG GCTGCTCACC GTGACCCGCC GCTACGACAC CGGCGCCGAG
GCCATCAACC GCCGCCTGCA CCGCCGCGTC ATCACCGCGG CCTCGGTCGA CTACGGCCCC
GACTTCTACC CCGGCGAGCC GGTGATGATG CGCCGCAACG ACTACGAGCG CGGCCTGTTC
AACGGCGACC AGGGCGTGGT CGTGCGCGTG TCCGAAAACG GCGAGCCGCA GCGCTTCCGC
CTGGCCTTTG CGCGCGGCGA GGAGTTCGCC GTGTTCTCGC TCGACGCCCT GCGCATGCAC
GTCGAGCTGG CGTTCGCGAT GACGGTTCAC AAGAGTCAGG GCTCGGAGTT CTCCGAGGTC
GCCCTGGTGC TGCCGCTCGA GGCCATCCCG CTGGCGACGC GCGAGATGCT GTACACGGGC
GTCACCCGCG CCCGCCGCGC CGTGGTCCTG GTGGGCGCGC CCGCGCTGCT GCGCACGGCC
ATCGCCCAGC GCGGCGAGCG CTTCTCGGGG CTGGCCGACA AGCTCGCGCC CGCGCCCGAT
GGCGCCGCCT ACGCCGAGGT CCGCGGATGA
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| Protein sequence | MKRSWLQISP RGTARERYEQ RVGLAPLASA AAAETSADSD AAAASEAERD AGERERLASF
FRNVAAGAHA HDLGDESLYL AEELAELQWS LAGRHKRAVA LLALATMISA RQGSSRLPID
LAPDGYLARL LGSLLSAGEM QLAPAEVLRD IEALPRLPAL DKVIGRPGEY RPLIFSDGCI
YQHRMLWCED QLAARLRERL GGARDDTSMA GRAAPRTTAG TAAGAAGDSA GAVAGDAASE
DAASAALAAV LARPAMVGAD AVVLSDEQAA AVRAATRQRF CVISGGPGTG KTAIVVTILR
TLARLGESPE SALLAAPTGK AANRMGSSIR SALLAVPDPD PVDRQLLERA SEPQTLHRLL
GYVPVLDRFR QHENNPLRAR TVIVDEASMI DAELMERLLR AVPSETRLVL LGDADQLPSV
DAGAVLRDLV AAGTGDDGGF ARRLTHSYRM DVRDPAGRAI LGAAQAMNRG ETALALPIRR
AAKELQWHGI ELLDTVGATG ATEGTTAPAA DIAAVNDFVD HWYDKRIASD REFARLSTKT
FQRHDDAFTP EDAADLRALM SIYERSRLLT VTRRYDTGAE AINRRLHRRV ITAASVDYGP
DFYPGEPVMM RRNDYERGLF NGDQGVVVRV SENGEPQRFR LAFARGEEFA VFSLDALRMH
VELAFAMTVH KSQGSEFSEV ALVLPLEAIP LATREMLYTG VTRARRAVVL VGAPALLRTA
IAQRGERFSG LADKLAPAPD GAAYAEVRG
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