| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5084 |
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| Symbol | |
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| ID | 8547495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7009894 |
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| End bp | 7010589 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646389760 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_003269465 |
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| Protein GI | 262198256 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.314621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.532171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGTT TCTGGAATCG CATGTCCAAT CTATGGCGCG GCTTCGTGTC CATCTGGGTT
GCCGACGTAG AAAAAAAACA CCCCGAAATC GCGTACGAAA ACGCCATCAA TTCGATGGTG
GAGAAGTACG TAAAGCTCAA ACAGGCCACC GCCGCCATCA TCCGGCGGCG CGATGACGTG
GCCGCTCGCC TCAAGTCGCG CAGCAAAGAG CTGCAACAGA TCGATGCCGA TCTGCAGACC
GCGGTCGCCA CCAACCAGGA AGACCTGGGC ATGGTGCTCA TCCAGAAGAA GGAATCTCTG
GTGGCCGAGA TCAGCGAGCT CAAGGGCGAA CTCGAGGGCT CGGTGCGCGA CGCCGACTCG
GCCAAGGCCT CGCTGATGCA GGTCCAGAGC GAAATTCAGA AGCTCAAGGC CGAGAAGGAG
AACATGATGG CCAAGATGGC TTCGGCCCAG GTCAAAGTGC GCATCCAGGA GCAGCTCGAG
GGCCTGAGCG TCGACGCCGA GGTCAAGGCG CTCGACAACG TGCGCGGGCA CATCAAAGAG
ACCATCGCCG AGGCCAACCT GGGCGAAGAG CTGGCCGAGT CGGACATCGA CGCGCGCCTG
CGCAAGCTGC GCAACGCCTC GGGCGACGTC ACGGCCAAGA GCGAGTGGGA GAAGCTCAAG
CAGGCGGCCG CGGCGAACGC GCAAAAAACC ATGTAA
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| Protein sequence | MAGFWNRMSN LWRGFVSIWV ADVEKKHPEI AYENAINSMV EKYVKLKQAT AAIIRRRDDV
AARLKSRSKE LQQIDADLQT AVATNQEDLG MVLIQKKESL VAEISELKGE LEGSVRDADS
AKASLMQVQS EIQKLKAEKE NMMAKMASAQ VKVRIQEQLE GLSVDAEVKA LDNVRGHIKE
TIAEANLGEE LAESDIDARL RKLRNASGDV TAKSEWEKLK QAAAANAQKT M
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