| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5066 |
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| Symbol | |
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| ID | 8547477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6985629 |
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| End bp | 6987698 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646389742 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003269447 |
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| Protein GI | 262198238 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.616948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTCG TGTCTAGCTT CTCGCCCTCC AAGGAGTTCT TCGAGCGCAT TCCGACCGCG
CCCGGCGTGT ACCTGATGAA GGACCGCAGC GGGCGCGTGG TCTACGTCGG CAAGGCCAAG
AACCTGCGCA CGCGCGTGCG CCAGTACTTC CGGCCCGGGG CCGACGCGCG CTTCTTCGTC
GCCGCCGGGC TGCTCGCGCG CGTGCTGGCC GACATCGACA CCGTGGTGGT CGACAACGAG
AAGGAGGCGC TGCTTCTCGA GAACCATCTG ATCAAGAAGC ATCAGCCGCG CTTCAACATC
AACCTGCGCG ACGACAAGCA GTACCTGGTG CTGCGCATCG ATCCCAACGC CGACTATCCG
CGCGTGGAGG TGGTGCGCAA CATCCGCGAC GATCAGGCGC GCTACTTCGG CCCCTACCAC
TCGGCGACCT CGTGCCGCGA GACCCTGCGG CTGCTCAACC GCCATTTTCA ACTGCGCACC
TGCACCGATC ACGTGCTGCG CACGCGAACG CGGCCGTGCC TGCAGTACCA GATCAAGCGC
TGTCCCGGAC CGTGCGTGTA CCCGGTCGAG CGCGACGCCT ACGCCGAGCA GGTCGACGAC
GTGATGATGT TCTTGGCCGG CAAGAACGAC CAGTTGGTCA CGCGCCTGCG CGAGCGCATG
AGCAGCTACG CCGAGCGCGA GGAGTTCGAG GCCGCCGCCC GCCTGCGCGA CTCCATCCAG
GCCGTGGATA AGACTCTGGC GCGGCAGAAC GTGGTCCAGG AGCAGTTTCT CGACCAGGAC
GTGTTCGGCA TGTGGCGCGA GGGCGACGTG GTCGAGATCG CGGTGCTGTT CATCCGCAAC
GGCAAGCTGG TCGGCCGCCG CAGCTTGCGC CAGGGCGATC AGGCCTTTCC CGACGGCCAG
GTGCTGGCTA ATTTCGTACA GCAGTACTAC GCCACCGGCA CGCTGGTGCC CGACGAGATC
GTGGTCGGCG TGGAGCTCGA CGACGAGGCC GTGATCGCCG AGTGGCTCGC CGGCCTGCGC
GGCAAGAAGG TCAAGATCCT GCATCCCCAG CGCAGCACGC GCGCGCGCCT GCTGGCGCTG
GCCGAGAAGA ACGCGGCCGC CTCGGCGGCG TCGCGCCAGA ACCGCGACCG CGACGCCGAG
GACACGCTGC GCAAGCTGCA GGCGCGGCTC GGTCTCAAGC GCCTGCCGCG GCGCATCGAG
TGCTTCGACA TCGCCCATAT CCAGGGCTCG GTGACCGTGG CCTCGATGGT GGTCTTTGTC
GACGGCGTGG CCGAGCGCTC GCTGTATCGC AAGTTCAAGG TCAAATCGGT GACCAACGAC
GATTTCGCCG CGATGTACGA AGTCCTGTCG CGGCGCTTTC GCCGCGCGCT GGCGGCGCAG
GCCGAGGCCG AGGCCACGGC TGAGGCCGAC GGGGTCGGCG AGGGCGAGGG CGAGGGCGCA
GACGGCACAG GCAAGACCGG CAGTAGCTGG GAGATGCCCG ATCTGCTGGT GGTCGACGGT
GGCAAAGGCC AGCTCGGACA AGCGCTCACC GCGCTCGCCG ACCTCGGCAT CAAGATCACG
GCGGAGAAGG GCTTCGACGT CATCGGCCTG GCCAAGGAGC GCGAGATCAG CGGCGAGGCG
CTGCCCGACC GCGTGTACCT GCGCAATCGC AAAGAGGCGG TGCGGCTGCG ACCCAACACC
GCCGAGCTGT ATTTGCTCTC GCGCGTGCGC GACGAGGCCC ATCGCTTTGC CAACACCTTC
CATCGCGAGC GCCGCAACCG CACCGCCTTG CGCTCGTCGC TCGACGACAT CCCCGGCATC
GGCGCCAAGC GGCGCCGCGC GCTGCTGCGC GAGCTCGGCA GCCTCAAGGC CATCAAGCAG
GCCTCGCTCG AGGAGCTGAG CGCGGTCTCG GGTATGGGCC GCAAAGCCGC CGAGGCCGTG
TATCGCTTCT TCGAGGGCGA GCGCGGCGGT GGCGAGCGCG GCGACGGTGG GGCCGTCACC
GGGGCGCCGG GTGCCAGCAG CGGCGAGCCC GCGGCCAGCG AATCCGCGGC CAATTCGGCC
GAGCAACCGG ATTCTCCCAG CGCGTCCTGA
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| Protein sequence | MTLVSSFSPS KEFFERIPTA PGVYLMKDRS GRVVYVGKAK NLRTRVRQYF RPGADARFFV
AAGLLARVLA DIDTVVVDNE KEALLLENHL IKKHQPRFNI NLRDDKQYLV LRIDPNADYP
RVEVVRNIRD DQARYFGPYH SATSCRETLR LLNRHFQLRT CTDHVLRTRT RPCLQYQIKR
CPGPCVYPVE RDAYAEQVDD VMMFLAGKND QLVTRLRERM SSYAEREEFE AAARLRDSIQ
AVDKTLARQN VVQEQFLDQD VFGMWREGDV VEIAVLFIRN GKLVGRRSLR QGDQAFPDGQ
VLANFVQQYY ATGTLVPDEI VVGVELDDEA VIAEWLAGLR GKKVKILHPQ RSTRARLLAL
AEKNAAASAA SRQNRDRDAE DTLRKLQARL GLKRLPRRIE CFDIAHIQGS VTVASMVVFV
DGVAERSLYR KFKVKSVTND DFAAMYEVLS RRFRRALAAQ AEAEATAEAD GVGEGEGEGA
DGTGKTGSSW EMPDLLVVDG GKGQLGQALT ALADLGIKIT AEKGFDVIGL AKEREISGEA
LPDRVYLRNR KEAVRLRPNT AELYLLSRVR DEAHRFANTF HRERRNRTAL RSSLDDIPGI
GAKRRRALLR ELGSLKAIKQ ASLEELSAVS GMGRKAAEAV YRFFEGERGG GERGDGGAVT
GAPGASSGEP AASESAANSA EQPDSPSAS
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