| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5061 |
|---|
| Symbol | |
|---|
| ID | 8547472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 6979771 |
|---|
| End bp | 6981738 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646389737 |
|---|
| Product | Thimet oligopeptidase |
|---|
| Protein accession | YP_003269442 |
|---|
| Protein GI | 262198233 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCAG CGACTGATAC TCCCGCCGCG TCCCCGTCCG CCGAGGCATT CGCCGCGCGC
TGCGACGAGG GCTTGCAGCG CGCCAAGGCG CTGCTGCCGA CGATCATCGA CGTCTCGGGT
CCGCGCACCC TGGAGAACAC GCTCGAGCCG TACAACGACA TGCTGATGCA TGCCGAGCGC
ACGGCCGGCC TGGCCGGTCT GATGTCATCC GTCCACCCGG ACGAAGTCAT CCGAGAGGCC
GCGCGCGCCA GCGAACAGGC CGTGGACGCC TTCATGTCGG GCCTCAGCCG CGACCGCCGC
CTGTACGAGG CCATCGCCGA GCTGGCCAAA TCGCCCGCGC ACGACTCCTT CGACGCCGAG
ACCCAGCGGC TCATCGAGCG CGGCCTGCGC GACTTCCACC GCAGCGGCGT CGACCGCGAC
GAGGCCACCC GCGAGCGCTT GCGCGCGATC GACGACCAGC TCACCAAGCT CGGACAGGCG
TTCCAAAAAG CCATCGTCGA CGACGTCCGC CACGTCGATG TCAACGATGT CTCGGAGCTG
GCCGGATTGC CCGAGGACTT CGTGCGCTCG CATCCGCCGC AGGAGGACGG CCGCATCCGC
ATCTCGACCG ACTTCCCCGA CTACCTGCCG GTGATGGCCT ACGCCGAGAA CGGCGACCTG
CGGCGCGCGC TGTACGTCTG CTACAAGGCC CGCGGCGGCG CGGCCAACGA GGCCACGCTC
AAGCAGATCC TGGTGCTGCG CGCGGAAAAA GCCAAGCTGC TCGGCTACGA GAGCTGGGCC
GACTACGCCA CCGAGAACAA GATGATGAAG AGCGGCGCCA ACGCCGCCGC GTTTATCGAC
CGCGTGGCCA AGATCGCTCG CCCGCGCGCC GAGCGCGACT ATCAGGAGCT GCTCGCGCGC
AAGCGCAAGC AGCACCCCGA TGCCCAGGGC GTGGACGACT TCGAGAAATA CTTCTACGAG
ACCAAGGTCA AAACCGAGTC GTACGCCTTC GACCCGCAGT CGGTGCGCCC GTACTTCGAG
TACGCTCGCG TCGAGCGCGG CCTGCTCGAT ATCACCGCGC GCATCTACGA CATCGCCTAC
GAGCCGGTGG CGCCCGAGCA GGTCGCCGAG CTGTGGCACC CCGACGTCAA GGTCTTCGAC
GTCACCCGCG AGGGCGAGGT GCTCGGCCGC ATCTTCCTCG ACATGCACCC GCGCGAGGGC
AAATACAAAC ACGCGGCCCA GTTCCCCTAC CGCTCGGGCG TACGCGGCAA GCAGATGCCC
GAGGGCGTGC TGGTGTGCAA CTTCCCCAAC CCGCGCACCA CCGACGGTCC GGCGCTGATG
GAACACCCCG ACGTGGTCAC CATGTTCCAC GAATTCGGAC ACCTGATGCA CCACGTGCTC
GGCGGCCACA AGCGCTGGAT CGAGCAGAGC GGCGTGGCCA CCGAGTGGGA CTTCGTCGAG
GCGCCCTCGC AGATGTTCGA GGAGTGGGCG TGGTCCCACG AGACCCTGGC CACCTTTGCC
CTGCACCACG AGACCGGCGA GCCCCTGCCC GAGGAGACCG TGCAGCGCAT GCGCCGGGCC
GACACCTTCG GCCTGGGGCT CAACACCATG CAGCAGATGT TCTACGCGTC CATCTCGCTC
GAGTTCCACA CCGTGGCTCC CGAAGAGCTC GACATGAACG CGGCCGTACA GCGGCTACAG
AGCGCGTACA CGCCCTTCCC CTTCGTCGAG GGCACCTGCT TCCACGCCAA CTTCGGACAC
CTGAACGGTT ACTCGGCCCT GTACTACACG TACATGTGGT CGCTGGTGAT CGCCAAGGAC
CTGCTCACGC CATTCAAAGA GCACGGCCTG CTCAATCTGG AGTGGACGCA CCGCTATCGC
GACCACGTCC TGGCGCCGGG CGGCAGCAAG GACGCCGCCG TGCTGGTCGA GGAGTTTCTC
GGCCGCACGT ACAAATTCGA CGCCTTCGAA GCCTATCTCG CCGGCTGA
|
|---|
| Protein sequence | MPPATDTPAA SPSAEAFAAR CDEGLQRAKA LLPTIIDVSG PRTLENTLEP YNDMLMHAER
TAGLAGLMSS VHPDEVIREA ARASEQAVDA FMSGLSRDRR LYEAIAELAK SPAHDSFDAE
TQRLIERGLR DFHRSGVDRD EATRERLRAI DDQLTKLGQA FQKAIVDDVR HVDVNDVSEL
AGLPEDFVRS HPPQEDGRIR ISTDFPDYLP VMAYAENGDL RRALYVCYKA RGGAANEATL
KQILVLRAEK AKLLGYESWA DYATENKMMK SGANAAAFID RVAKIARPRA ERDYQELLAR
KRKQHPDAQG VDDFEKYFYE TKVKTESYAF DPQSVRPYFE YARVERGLLD ITARIYDIAY
EPVAPEQVAE LWHPDVKVFD VTREGEVLGR IFLDMHPREG KYKHAAQFPY RSGVRGKQMP
EGVLVCNFPN PRTTDGPALM EHPDVVTMFH EFGHLMHHVL GGHKRWIEQS GVATEWDFVE
APSQMFEEWA WSHETLATFA LHHETGEPLP EETVQRMRRA DTFGLGLNTM QQMFYASISL
EFHTVAPEEL DMNAAVQRLQ SAYTPFPFVE GTCFHANFGH LNGYSALYYT YMWSLVIAKD
LLTPFKEHGL LNLEWTHRYR DHVLAPGGSK DAAVLVEEFL GRTYKFDAFE AYLAG
|
|---|
| |