| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5025 |
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| Symbol | |
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| ID | 8547435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6933643 |
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| End bp | 6935334 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646389701 |
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| Product | Patatin |
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| Protein accession | YP_003269407 |
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| Protein GI | 262198198 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.71929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.155032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAC GGAAAATCGC GCTGGTTCTG GCTGGCGGAG TGTCGCTCGG CAGCTACGAG
GCCGGCGTCC TCGCCGAGCT GCTCTACGCT CTCGACTGGC TCAATCGCCC CGAAACCCTC
GACGGACGCG ACCCCTTCGA GCTCGACATC ATGACCGGCG CCTCGGCCGG TGGCATGACG
GCCGCCCTGG TGGCCCGCAT CATGATGTAC GACCTACCCG GGCGGCGCGA CCACCTGCGC
AGAGTATGGG TCGACGGCGT GGACATCGTC GGCTTACTCG ATCAACAAGA CGTGCCGCTC
AACGCGCTGC TGTCCAAACG CGTGCTCGCG CAGCTCGCGC ACGACTACGT GGTCAAGGGC
AGCGACGCGC CGCCCATCGC GCCGGCCTCC TTCGCGCCCG AGCGCCTGCA CCTGAGCCTA
ACGCTCAGCA ACATGCACGG CATCAGCTAC GAGATTCCGT ATTTCGCCTC TACTGACAGC
GAGAGCCAGT TCGTGACCAC GATGTTTTCG GACATGGCGA ACTTCACCCT CGAGCGCGCA
GACCTCCCGG GGCGGCGCGT CTGGGACACC ATCGTCCAGT CCGCGCTGGC CTGCGGCAGC
TTCCCCTTCG CGTTTCAGCC GCACCCGCTG CGGCGCAGCA GCAGCGACTA CCGCGGCTCG
ATGCAGGAGC ACGACACGGC GCTCTTCGAC CGCGACATGA TGTTCATCGA CGGCGGCATG
TTCAACAACG AGCCGCTGGG CGAAGCCATC GACACCGCCA GCGATGTCGA CGGCGGCACC
ATCGAACCCG ACCGCATTTT CCTGCTCGTC GATCCCAACA TCAACGCGTC GAACCACGTG
AGCGAGATCC TGCTCGACGA CAGCATCACC AAGCACGCCC TGCGCATGGG CCAGATGCTG
CTCGGCGAGA GCACGGCGCG CGAGTGGCTG CGCGCCAACC GCACCAACGT CGACATCGAG
TGGCGCGACC ATCTGGTGAG TCAGGTCGGC CGCATGCTGC GCGAGGCTGA GCTGGCCGAT
GCCGCCGCCA TGGCCGCGGC CATGAAAGCC CTGGCGTCCG AAATCGTCGC CCGGCGGCGC
GCGCTCCTGG GCGCGGACGA GGTGCCCGAT AGCTACCTCG AGAGCCGCAG CGCGCGCACG
ATGAAGGGCG AGCCATTCGC CGCGCTCTAC GCTTCGCTGG GCGCCTCCTC GGGCGAGGAT
GGCGGCGCGC AGCCGACGCA CAAACAGGAG CTGTTCCGCT ACCTGGTGTT CGTGCTCAAC
ACGGTCTCCA ACCTCAAGAA CAAGCAGAAG ATCCACCTGT CGCTGATCGG CGCCGACAAG
CGCCAGGTCG CCGGCGACAC GCTCAGCGGC TTCGGCGGCT TCTTCGAGCA TAGCTGGCGC
CTGCACGACT ACCGCGTGGG CCGGCGCAAC GCCCACGCGC TGTTGCCCAC GATGCTCGGT
GTGCCCGCCT ACGCCAAGGA GCCGGGCACG CATGAGGGCG CGCACGAGGA CTACCACCTC
CCGCCCGAGT GGGCCGACTA CCCCAACATC ACCATCGAAA AGGCCTCGCA CGCGCGCCGC
ATCGCGTTCT CCGAGGTGGT GCTGGCGCGG GCTGACACAG TGATGAGCGA GTTTGGCATA
CCCAAGCCGG TGCGCTGGGT GGCGCGCACG GTGTTCCTCA AGCGCTGGCT CGCGGGCAAG
CTGGGCCTGT AA
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| Protein sequence | MKTRKIALVL AGGVSLGSYE AGVLAELLYA LDWLNRPETL DGRDPFELDI MTGASAGGMT
AALVARIMMY DLPGRRDHLR RVWVDGVDIV GLLDQQDVPL NALLSKRVLA QLAHDYVVKG
SDAPPIAPAS FAPERLHLSL TLSNMHGISY EIPYFASTDS ESQFVTTMFS DMANFTLERA
DLPGRRVWDT IVQSALACGS FPFAFQPHPL RRSSSDYRGS MQEHDTALFD RDMMFIDGGM
FNNEPLGEAI DTASDVDGGT IEPDRIFLLV DPNINASNHV SEILLDDSIT KHALRMGQML
LGESTAREWL RANRTNVDIE WRDHLVSQVG RMLREAELAD AAAMAAAMKA LASEIVARRR
ALLGADEVPD SYLESRSART MKGEPFAALY ASLGASSGED GGAQPTHKQE LFRYLVFVLN
TVSNLKNKQK IHLSLIGADK RQVAGDTLSG FGGFFEHSWR LHDYRVGRRN AHALLPTMLG
VPAYAKEPGT HEGAHEDYHL PPEWADYPNI TIEKASHARR IAFSEVVLAR ADTVMSEFGI
PKPVRWVART VFLKRWLAGK LGL
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