| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5005 |
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| Symbol | |
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| ID | 8547415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6902859 |
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| End bp | 6904301 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646389681 |
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| Product | peptidase M20 |
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| Protein accession | YP_003269387 |
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| Protein GI | 262198178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.579178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAACCA ACGCGAAGAA ACCCGACACC AAGCAAGTCC ACGACTTCGT GGAGCGAGCC
TTCGAGAGTT CGATCCTCGA CGTGCTCACC GACTACATCC GCATCCCCAA CAAATCGCCG
TCGTTCGACC CCGAGTGGCA GACCGCCGGC CACATGGACC AGGCGGTCGA ACTCCTGGCC
AACTGGGCGC GCGCCAACGA GATCCCGGGC ATGAAGCTCT CGGTCGAGCG GCTGCCCGAA
CGCACGCCCG TGATCTTCAT CGAGATCCCG GCCAACGGCG ACGCCCGCGC CGACGACACC
GTGCTGCTCT ACGGACACCT CGACAAGCAG CCGGAGATGA CCGGCTGGGA CGAGGACAAA
GGCCCGTGGG TGCCCGTGCA CGAGGGCGAC AAGCTCTACG GCCGCGGCGG CGCCGACGAC
GGCTACTCCA TCTTCGCCTC GCTCACGGCC ATCCGCGCGC TGCGCGAGCA GAACATTCCC
CACGCCCGCT GCGTCGTGCT CATCGAGGGC TGCGAGGAGA GCGGCAGCTA CGACCTGCCG
CACTACATCG AGGCGCTCAA GGACCGCATC GGCACGCCCA GCCTGGTGGT CTGCCTCGAC
TCCGGCTGCG GCAACTACGA CCAGATGTGG TGCACCACCT CGCTGCGCGG CATGGTCGTC
GGCAGCCTGC GCGTGTCGCT GCTGGCCGAG GGCGTGCACT CGGGCGACGC CAGCGGCGTC
GTGGCCTCGA GCTTCCGCGT CGCCCGGCAC CTGCTCAGCC GCCTGGAGAA CGCGGCCACC
GGCGACGTCG TGCCCAAGGA GCTGTACGTC GAGATCCCGC GCGATCGCGT GCTGCAAGCC
GGACGCTGTG CCGAAATCCT CGGCTCCGCG GTGTACGACA AGTTCCCGTT CCACGAGGGC
GTCGCGCCGG TCGGCGACGA CCCCGCCGAG CTCGCCCTCA ACCGCACCTG GCGGCCCTCG
GTGGCCGTTA CCGGCGCCGA CGGCATGCCG CTCCCGGGCA GCGCCGGCAA CGTGATGCGC
CCCTTCACCC TGCTCAAGCT GAGCATGCGC CTGCCGCCCA CGCTCGACTC GGAGACCGCG
CTCAAATTCG TCACCGAGCT GCTCACCAAG GATCCGCCGT ACAACGCGCA CGTCGAGTTC
ACCGGCGCCG AGAGCGCCGA TGGCTGGAAC GCGCCGCCGG TGGCGCCCTG GCTCGAGGCG
GCCATGAACC AGGCGTCCCA GGATTATTTC GGACGCGAGG CCGCGTTCAT GGGAGAGGGC
GGCAGCATCC CGTTCATGGG CATGCTGGGC GAGGCCTTTC CCGAGGCCCA GTTCCTCATC
ACCGGCGTGC TCGGACCCCA CTCCAACGCC CACGGCCCCA ACGAGTTCTT GCACGTGCCC
ACGGCCAAGC GGCTCACCTG CTGCGTGGCC GACGTCGTCG CCGCCCACTA CACCCGCAGC
TAG
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| Protein sequence | MATNAKKPDT KQVHDFVERA FESSILDVLT DYIRIPNKSP SFDPEWQTAG HMDQAVELLA
NWARANEIPG MKLSVERLPE RTPVIFIEIP ANGDARADDT VLLYGHLDKQ PEMTGWDEDK
GPWVPVHEGD KLYGRGGADD GYSIFASLTA IRALREQNIP HARCVVLIEG CEESGSYDLP
HYIEALKDRI GTPSLVVCLD SGCGNYDQMW CTTSLRGMVV GSLRVSLLAE GVHSGDASGV
VASSFRVARH LLSRLENAAT GDVVPKELYV EIPRDRVLQA GRCAEILGSA VYDKFPFHEG
VAPVGDDPAE LALNRTWRPS VAVTGADGMP LPGSAGNVMR PFTLLKLSMR LPPTLDSETA
LKFVTELLTK DPPYNAHVEF TGAESADGWN APPVAPWLEA AMNQASQDYF GREAAFMGEG
GSIPFMGMLG EAFPEAQFLI TGVLGPHSNA HGPNEFLHVP TAKRLTCCVA DVVAAHYTRS
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