| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4984 |
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| Symbol | |
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| ID | 8547392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6870619 |
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| End bp | 6871965 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646389658 |
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| Product | trigger factor |
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| Protein accession | YP_003269366 |
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| Protein GI | 262198157 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.555193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTTC GAATCGAAGA CGTCTCGCCG GTCGAGAAGA AGCTCATCGT CGAAGTGCCT
TGGGACACGG TCAACGGCAA GCTCAGCGAC ATGTATCGCA AGCTGTCGCG CAGCGTGCAG
ATCAAAGGCT TCCGCAAGGG CAAAGTCCCG ATGAGCGTGG TCAAGCAAAT GTACGGAAAG
CACGTGCGCT CCGAGGTCAC CGAGCAGCTC GTGCGCGAGG GTTTCCTCGA GGCCACCTCG
GGTCACGAGC TGGCCGCGGT GTCCGAGCCG CGCGTCGAGA CGCTGTCCGA GATCCGCTCG
GGCGAGCCGT TCTCGTTCGA GGCGGTGGTC GAGGTCCGCG GCGAGGTCGA GGCCAAAGAC
TACAAGGGCA TGGCGCTCAC CCGCCGGCCG CTGGTGGTCG AGGACGAGGA GATCGCCACG
CAGCTCGAGC AGCTCCGCCA GGAGAACGCC GAGCTGCAGC CCATCGAGGG TCGCGAGCGC
ACCGCCAAGA GCGACGTGCT GACCATGTCG CTCGAGGGCA CCATCGGCGA GCAGCCGGTC
AATCAGCCGC AGATCCACGT CGATCTCGGC GACGCCGAGC ACGAGCCGCT GCCCGGCATG
ATCGACGCGC TCACCGATCT GCCGCTCGAC GCCAAGGACC ACAAGCTCGA GCTCACCATC
CCCGAGGACT TCCAGGAGCA GAGCGTGGCC GGCCAGGCCG CGTCCTTCAC GATCACCATC
ACCGACGCGC GGGTGAAGAC CCTGCCCGAG CTCGACGATG ACTTCGCCAA GGACCTCGAG
CGCGGCGAGT CCCTCGACGA GCTGCGCCAG AGCATCCGCG CGGACATCGA GAAGCAGCGC
CAGTCGCAGA TCGACCGCGA GCTGAAGCAG TCGGCGATCA AAGAGCTGGT CAAGCGCAAC
GAGATTCCGG TGGCGCCGAC GCTGGTCGAC CGCGGCGTCG AGTTCCAGAT GCAGCGCCTG
GCCGGCATGA TGGGCATGCC GCCGGGCTCG GATCCGCGCC AGCTCCTCAC CGACGAGATG
CGCGAGCAGA TGCGGCCCTC GGCCCTCGAG GAGATCCGCG GGCAGCTCCT GCTCGAGGCC
ATCGCCGACC AGGAGTCGAT CGAGATCAGC GACGAGGATC TCGACGCGCA CCTGAGCGAG
ATCGCCGAGC GCCGCAACGA GCCCGTGGCT CGCCTGCGCG CCCAGTACGA GCGCGACGGC
AAGCTCGACT CGATCCGCTA CCAGCTCCGC CAGGACAAGG CCCTCGACCT GATCGTCGAG
CACGCTGAGG TCACCGAGGC CGAGCCCGAG CCCGAGCCCG CCGACGACGC TGCCGACGCC
GAGTCGGGCA GCGACGACCA GGGCTGA
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| Protein sequence | MQVRIEDVSP VEKKLIVEVP WDTVNGKLSD MYRKLSRSVQ IKGFRKGKVP MSVVKQMYGK
HVRSEVTEQL VREGFLEATS GHELAAVSEP RVETLSEIRS GEPFSFEAVV EVRGEVEAKD
YKGMALTRRP LVVEDEEIAT QLEQLRQENA ELQPIEGRER TAKSDVLTMS LEGTIGEQPV
NQPQIHVDLG DAEHEPLPGM IDALTDLPLD AKDHKLELTI PEDFQEQSVA GQAASFTITI
TDARVKTLPE LDDDFAKDLE RGESLDELRQ SIRADIEKQR QSQIDRELKQ SAIKELVKRN
EIPVAPTLVD RGVEFQMQRL AGMMGMPPGS DPRQLLTDEM REQMRPSALE EIRGQLLLEA
IADQESIEIS DEDLDAHLSE IAERRNEPVA RLRAQYERDG KLDSIRYQLR QDKALDLIVE
HAEVTEAEPE PEPADDAADA ESGSDDQG
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