Gene Hoch_4853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4853 
Symbol 
ID8547260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6642136 
End bp6642432 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content56% 
IMG OID646389526 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_003269235 
Protein GI262198026 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA GAACAACATT TATTGTTTGC TACGACATCT GCGACGCGCG TCGGCTGCGT 
CTGGTGTACA AGGTGATGCG CGGTTACGGA CAGCATCTGC AGTATTCCGT ATTTCGCTGT
GACTTGAGCG CATCCGAGCG CGTCAAGCTC GCCACCGAAC TCGAGGATAT CGTCCATCAC
GGCGACGATC AGGTGATGTT CGTGCCCCTC GGCCCTCCCG AAGGCTTCAA CGCTACCAAC
TTCGAGACCA TCGGGCGGCC AATGCAGACA TTCGAGCGTC ACGCAGTGGT AGTATGA
 
Protein sequence
MSNRTTFIVC YDICDARRLR LVYKVMRGYG QHLQYSVFRC DLSASERVKL ATELEDIVHH 
GDDQVMFVPL GPPEGFNATN FETIGRPMQT FERHAVVV