| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4836 |
|---|
| Symbol | |
|---|
| ID | 8547243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 6618673 |
|---|
| End bp | 6619944 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646389509 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003269218 |
|---|
| Protein GI | 262198009 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0503623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGAAA TAAAACCCGA CTCGGAAGCA GCCGATTCGG AGCTCGGCGG CGCCGAACCG
GCCGGTAAGT GGACCTACCT CGGCCTGCTG GCGGCGGTGG AGTTCTTGGC CATGACCGTG
TGGTTTTCGG CCACCGCGGT GGTGCCGCAG CTCGTCGAGG CGTGGTCGTT GGCGCCCGGC
CAGGTGAGCT GGCTGACCAT GAGCGTGCAG CTCGGATTCG TGTTCGGCGC CCTGGGCAGC
GCGTTTCTCA ACCTCCCCGA CCGGGTGGCG CTGCCGCGGC TGATCGGCGC CAGCGCGCTG
CTGGCCGCGC TCGCCAACGC CGCGATTCCG CTGCTCGAGC CGGTCCCCTC GGCCGTCATC
GCGCTGCGCT TTGTCACCGG CATGGCGCTC GCGGGCGTGT ATCCGCCGGG TATGAAGCTG
GTGGCGACCT GGAGCCTGCG CGCGCGCGGT CTCGGCATCG GTATCATGGT CGGCGCGCTC
ACCTTGGGTT CGGCGGCGCC GCATCTGCTC AACGCCTTTC CGCTGTTCGG CGACGGCGGC
ATGCCGCCTT GGCGCGCGGT GCTGGGGGCG ACCTCGGCGC TGGCCGCGCT GGCCGCGCTG
CTGTCCTTTG CCTGGCTGCG CGCGGGCCCG CTGCTGTCGG CGTCGGCGCC CTTTGACTGG
CGCTCGCTCA CCCAGGGGCT GCGCGACCGG CCCACGCGCC TGGCCAATTT CGGCTATCTC
GGCCACATGT GGGAGCTCTA CGCGATGTGG GCCTGGGTGC CGCTGTTCCT GTTGCAGCGC
TACCAGGCGG CCGGTCTGCC GACGGAGGCG GCGCGGCTGG CCGGCTTCGG CGTGGTCGCC
GTGGGCGCGC TCGGCTGTGT GGTGGCGGGC GTGATCGCCG ATCGCCTGGG ACGGACGCTG
GTGACCTCGC TGAGCATGAT CGTCTCGGGC GGCTGCGCGC TGGCTGTCGG ACTGGTGTAC
GATCACCCGC TGCTGCTCAC CGCGCTGTGT CTGCTGTGGG GGCTGGCCGT GGTCGCCGAC
AGCGCGCAGT TCAGCGCCGC GGTGTCCGAA CTGGCCGATC GCCGCTACGT GGGCACCGCG
CTCACGGTGC AGACAGCCAT GGGCTTCTTG CTCACGCTGA TCTCGATCCG CGCGGTGCCG
CCGCTGGCCG AGCTGGTGGG CTGGCGCTGG GTGTTCGCCA GCCTGGCGCT GGGGCCGCTC
TTCGGCACCG TGAGCATGCT GCGGTTGCGC GCGCTGCCGG CGGCCGCCGC CATGGCGTCC
GGACGTCGCT GA
|
|---|
| Protein sequence | MSEIKPDSEA ADSELGGAEP AGKWTYLGLL AAVEFLAMTV WFSATAVVPQ LVEAWSLAPG
QVSWLTMSVQ LGFVFGALGS AFLNLPDRVA LPRLIGASAL LAALANAAIP LLEPVPSAVI
ALRFVTGMAL AGVYPPGMKL VATWSLRARG LGIGIMVGAL TLGSAAPHLL NAFPLFGDGG
MPPWRAVLGA TSALAALAAL LSFAWLRAGP LLSASAPFDW RSLTQGLRDR PTRLANFGYL
GHMWELYAMW AWVPLFLLQR YQAAGLPTEA ARLAGFGVVA VGALGCVVAG VIADRLGRTL
VTSLSMIVSG GCALAVGLVY DHPLLLTALC LLWGLAVVAD SAQFSAAVSE LADRRYVGTA
LTVQTAMGFL LTLISIRAVP PLAELVGWRW VFASLALGPL FGTVSMLRLR ALPAAAAMAS
GRR
|
|---|
| |