Gene Hoch_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_4018 
Symbol 
ID8546414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5519308 
End bp5519832 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID646388690 
Productribosomal protein L10 
Protein accessionYP_003268410 
Protein GI262197201 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.491975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGGT TAGCGAAGGA ACAAGTCGTC AACGAGATGA AGGGCACCAT GTCCAACGTC 
ATGAGCGTCG TCGTTGCCGA CTATCGTGGG TTGGACGTTC CCACGGTGAC CCACATGCGT
GAGGAGTTCC GCAAGGCCGG CTGCGGCTAC CGCGTCGTGA AGAACACGCT GCTCAAGATC
GCGGTCAAGG GCTCCGATGT CGAGCCGCTG TCGTCGCTGC TCAGCGGTCC CACGGCGGTG
ATGTGGTCGA ACGAGTCGCC CTCGGCCCCG GCCAAGCTGG CGCTGCAGTT CGCCAAAGAG
AAGAAGGCCT TCAACATCCG CGGCGGTTAC TTCGAGGGCC AGGTCCTCGA TATGGACGGC
GTCGAGCGGC TGTCGAAGAT GCCGGGCAAG CAGGAGCTTC AGGCCACGCT GCTCATGACC
TTTCTCGCCG CGCCGCAGAA CTTCGTCCGG CAGATCATCG CCGCGCCGCA GAACTTTGCC
TACCTCATCG ACGCGCGCAA GCGTTCGCTC GAAGGCGGCG CCTGA
 
Protein sequence
MDRLAKEQVV NEMKGTMSNV MSVVVADYRG LDVPTVTHMR EEFRKAGCGY RVVKNTLLKI 
AVKGSDVEPL SSLLSGPTAV MWSNESPSAP AKLALQFAKE KKAFNIRGGY FEGQVLDMDG
VERLSKMPGK QELQATLLMT FLAAPQNFVR QIIAAPQNFA YLIDARKRSL EGGA