| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3975 |
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| Symbol | |
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| ID | 8546371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5478977 |
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| End bp | 5480662 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646388647 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_003268367 |
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| Protein GI | 262197158 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.761967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCC AGGAACGCCC CGAGCAGACT CTGCACCGCA TCATCGGCGA GCGCCGCGAC
AAGGCGGCGG AGCTGCGCGA CCTCGGTCAG AATCCGTATC GCAACGACTT TCGCCCGACG
CACCAGTGCG CCGAGGTGCG TGCCAAGTAC GAGGGTACCC AGCCCAGCGA GCCGCCCAGC
AAGGGCATCC AGCCGGTCGA TGGCGAGACC ATTCGCCTGG CCGGCCGGCT GGTCGCGCGC
CGCGGCTTCG GCAAGACCGT GTTCGCGCCC ATCCGCGACA GCAGCGGCGA CCTGCAGCTC
TTCCTCAATG TCGACCACCT GGACCAAGAC GCCTTCGAGA AGCTGCTGCC GCGGCTCGAC
GTCGGCGACC AGGTCGGCGC CGAGGGCGTG ATCTTCTGGA CCAAACGCGG CGAGCTGTCG
CTGCTGTGCA CGCACTTCCA CATCCTGAGC AAGTCGCTGC GGCCGCTGCC CGACAAGTGG
AAGGGCCTCA CCAACGTCGA GACCCGCTAT CGCCAGCGCT ATCTCGACCT GGCGGTCAAC
CCCGAGGTCC GCGAGGTGTT CCGCAAGCGC TCGCAGATCC TGCGCGGTCT GCGCCGCTTC
TTCGACGCGC GCGCCTTCCT CGAGGTCGAG ACGCCGATGA TGCACCCGGT GATCGGCGGC
GCCGCGGCGC GGCCCTTCGT CACCCATCAC AACGCGCTCG ACCTCACCCT GTATCTGCGC
ATCGCGCCCG AGCTGTACCT CAAGCGCCTG CTGGTCGGCG GCTTCGACCG GGTGTACGAG
ATCAACCGCA GCTTCCGCAA CGAGGGCCTG TCGCGCGCGC ACAACCCCGA GTTCACGATG
CTCGAGTTCT ATCAGGCCTA CGCCGACTAC CGCGACCTGA TGGACCTCAC CGAGGAGCTG
TTCACCGAGC TGGCGCAGGA GGTCAACGGC ACGCTCGAGA CCACCTGGGA CGGCAAGGCG
ATCGATCTCG CGCGCCCCTG GCAGCGCCTG AGCGTGCGCC GGGCGGTGAC CGAGGTGGCC
GGGCGCAGCC CCGAGGTGTT CGACGATCCG GTGCGCGCCG CCGAAGAGGC GCTGGCGGTC
GATGCTCCGG CCGGCGATGT GCTGAGCGCG CTGCTCGAGT CGCTCTCGGC CGACGAGCTC
AGCGCGCTGG GCGGCCGCGA GGCGCTGGGC AAGATCTGGG AGGATCCGGC GCAGCGGCCG
GCGCTGGCTA CCAAGATCAG CGAGCGCTAC GCCGATGAGC ACACCCGCCG GGTGCGCGCC
GGACACGTGG CCTTTGCCAT CTTCGAGGCC GCGGTCGAGG AGAGCCTGGT GCAGCCGACC
TTCCTCACCG ATTTCCCGCT GGCGGTGTCG CCGTTGGCGC GCCGCAACGA GGACGACCCC
GCGTTCTGCG ACCGCTTCGA GCTGTTCATC GGCGGCTCCG AGATGGCCAA CGCGTTCAGC
GAGCTCAACG ATCCCGACGA CCAGCGCACG CGCTTCCAGG CGCAGCTCGA GGCCCGCGCC
CAGGGCCAGG ACGAGACCAT GGACTACGAC GAGGATTACT GCCGCGCGCT CGAGGTCGGC
ATGCCGCCGG CGGCGGGCGA GGGCATCGGC ATCGATCGCC TGACCATGCT GCTCACCGGC
CAGAGCTCGA TCCGCGACGT CATCCTGTTC CCGCAGATGC GCCCGGAGTC CTCGCAGGTC
GAATGA
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| Protein sequence | MSSQERPEQT LHRIIGERRD KAAELRDLGQ NPYRNDFRPT HQCAEVRAKY EGTQPSEPPS
KGIQPVDGET IRLAGRLVAR RGFGKTVFAP IRDSSGDLQL FLNVDHLDQD AFEKLLPRLD
VGDQVGAEGV IFWTKRGELS LLCTHFHILS KSLRPLPDKW KGLTNVETRY RQRYLDLAVN
PEVREVFRKR SQILRGLRRF FDARAFLEVE TPMMHPVIGG AAARPFVTHH NALDLTLYLR
IAPELYLKRL LVGGFDRVYE INRSFRNEGL SRAHNPEFTM LEFYQAYADY RDLMDLTEEL
FTELAQEVNG TLETTWDGKA IDLARPWQRL SVRRAVTEVA GRSPEVFDDP VRAAEEALAV
DAPAGDVLSA LLESLSADEL SALGGREALG KIWEDPAQRP ALATKISERY ADEHTRRVRA
GHVAFAIFEA AVEESLVQPT FLTDFPLAVS PLARRNEDDP AFCDRFELFI GGSEMANAFS
ELNDPDDQRT RFQAQLEARA QGQDETMDYD EDYCRALEVG MPPAAGEGIG IDRLTMLLTG
QSSIRDVILF PQMRPESSQV E
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