| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3972 |
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| Symbol | |
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| ID | 8546368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5472496 |
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| End bp | 5475042 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646388644 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_003268364 |
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| Protein GI | 262197155 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0128783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.80602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGAC GTCGATACCG AGTGGCAGCC GCGGCTCTCG TGGCCGCCTG CCTCGCCTGG
GTCTCCCCGA TCCTGACGAC TCTGACGACT CCGAGCACCC CGACCTGGCT CGCCATCCCC
AGCGCCCACG CGCAGGGCGA CGCGACGCCG GCCGCCACCA CCAGCGACGA CCTCTACGGC
CGCACCGTGG CGCGCATCCA GTTCCGCGGC AACCGCAAGG TCGAGGACGA CGCCATCCGC
GTCAACCTGC GCGCGCGCCC CGGCGCCATC CTCACGCCCG AGACCGTACG CGCCGATCTG
CGCGCGGTCT GGGGCATGGG CTTTTTCCAG GACGTGGTGG TCGAGGCCGA GCCCGAGGGC
GACGACAAGG TGGTGCTGAT CTTCGCCGTG GCCGAGAAGC CCGCGGTGCG CAAGGTGCTG
CTGTCGGGCA ACGACGAGGT CACGCGCGAC GCCATCAACG AGGTCCTCGA CCTCAAGCGC
GACATCATCC TCGACGTCGG CAAGGTCAAA GAGAACCGCG ACAAGATCCG CGCGCTGTAC
GTCGAGAAGG GCTTCTACCT GGCCTCAGTC GAGTACGAGC TGCGCCCGGC CGAGGGCGGC
GAGGTCGACG TCTGGTTCGT GATCCAGGAG CGCTCCAAGG TGCAGATCCG CGACGTGAGC
TTCATCGGCA ACGAGAAGGT CACCGACGAC GAGCTGCGCA GCATCATCAC CACCAGCGCG
GGCGGCGCGC TGTCGTTCAT CAGCGACAGC GGCATCTTTC AGCAGGAGAC CTTCGAGCGC
GACCTGTTCA TGATCCAGGC GTATTACTAC GACCGCGGCT TCATCAACGT GAAGCTCGGT
TCGCCCCAGA TCCGGCTCTC GCGCGACAAG CGCTACATGT ATCTGTCGAT CCCGATCGAC
GAGGGGCCGG TGTTCCACAT CGGCGATATC GAGTTCGAGG GCGACCTGAT CGGCGAGAAG
GCCGACTACT ACGAGCGGCT CACGGTCGAG CGCGGCGAGG TCTTCAACCG CAGCAAGGTC
GGCAGTGACA TCAACGCGCT CACCAACTTC TACAAGGACA AGGGCTACGC CTACGTCAAC
GTGACGCCGC TGACCAAGCT CGACCTCGAG GGCCGCATCG TGGCGCTCAC CTTCGAGATC
GAGCGCGGCA ACAAGGTCTA CTTCGAGCGC ATCAACGTGC GCGGCAACAG CAAGACCCGC
GACAAGGTCA TCCGCCGCGA GATGAAGGTC TCCGAGGGCG AGCTGTACAG CCAGACCAGC
CTCGACGCCT CGCGCCGGCG CATCGAGGCG CTGGGCTTCT TCGAGACGCC GGTCAACATC
TCGACCAAGC GCGGCTCGAG CGACGAGTTC ATCGAGGTCA ACGTCGAGGT CATCGAGCGC
CCGACCGGCA CCTTCCAGAT CGGCGCCGGC TTCTCGTCGG TGGAGAGCTT CATCGCGCAG
GCGCAGATCT CGCAGAACAA CCTCTTTGGC CGCGGCCAGA CGCTCACCCT GCAGGCGCAA
CTCTCGGGCC TGCGCCAGCT CTTCCTGCTG CGCTTCGTCG AGCCCTACCT GCTCGACACC
AACTGGACCT TCGCCTTCGA CCTGTTCAAT CAGAGCCGCG ACTTCGGCAC CGGCTTCCGG
CGCAACTCGA CCGGTGGCAA CCTCACCTGG GGCTATCCGC TGTCGTGGGA GTCGCGCGTG
TTCCTCACCT ACAAGCTGGA GAAGGTCGGC GTCGACGAGA GCGGCACCAT CTCCTTTGGC
CAGAACCGCG CGCCGGTGGA GGCCGAGAGC ATCGCCAACC TGTTCCGCGA TGGCTGGACC
TCGTCGCTCA AAGCCTCGGT GTCCTACGAC TCGCGCAACA ACCGCCTGTT CCCGACCGAG
GGCTGGAACC TCAACGGCTT CTTCGAGGTC GCCGACGGCA AGTTCGGCTC CAGCGTGATC
ACGGACGAGC CCAACAAGTT CTTCCGCTAC GGCGGCTTCG CGCGCCACTA CCGGCCGATC
TGGGGCCCCT TCATCCTCAA GCTCAACACC GAGATCGGCG TCACCGTCAA CCCGGACGAA
GAGGGCGTAC CCATCACCGA GCGCTACCTC ATCGGCGGTA TCTACGACGT CCGCGGATAC
CGGCCGCGCT CGCTCGGGCC GCGGGTTTTC GTCCAGGGTG TCGGCGACCC CAGCGGCAGC
GATCTGCGCT CGTTCACGCT CGGCGGCAAC CTGCAGATCA TCGGCAACGC CGAGATCGAG
TTCCCGCTGT TCGAGCGCGT CGGCATCTCG GGCGTGGTGT TCATGGACGT GGGCAACGCC
TTCAACCTCG AGAGCCGCTA CTGCGCCAGC GCCTCGGGCA GCGCCGGCAG CCTGTCGCCG
AAGTTCGACC CCTGCTTCCT CGAGCAGTTC CCGGGCTCGC TCATCCACGG CCTGCGGCGC
TCGGTCGGCT TTGGTTTCCG CTGGTTTTCG CCCATCGGCC CGCTGCGCTT TGAATGGGGC
ATCCCGCTCG ACCGTCAGGT ACTGCCGGAT AACGAAGGCG AAGAGGAGAG CCTGGTCTTC
GAGTTCACCA TCGGTAACTT CTTCTGA
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| Protein sequence | MIRRRYRVAA AALVAACLAW VSPILTTLTT PSTPTWLAIP SAHAQGDATP AATTSDDLYG
RTVARIQFRG NRKVEDDAIR VNLRARPGAI LTPETVRADL RAVWGMGFFQ DVVVEAEPEG
DDKVVLIFAV AEKPAVRKVL LSGNDEVTRD AINEVLDLKR DIILDVGKVK ENRDKIRALY
VEKGFYLASV EYELRPAEGG EVDVWFVIQE RSKVQIRDVS FIGNEKVTDD ELRSIITTSA
GGALSFISDS GIFQQETFER DLFMIQAYYY DRGFINVKLG SPQIRLSRDK RYMYLSIPID
EGPVFHIGDI EFEGDLIGEK ADYYERLTVE RGEVFNRSKV GSDINALTNF YKDKGYAYVN
VTPLTKLDLE GRIVALTFEI ERGNKVYFER INVRGNSKTR DKVIRREMKV SEGELYSQTS
LDASRRRIEA LGFFETPVNI STKRGSSDEF IEVNVEVIER PTGTFQIGAG FSSVESFIAQ
AQISQNNLFG RGQTLTLQAQ LSGLRQLFLL RFVEPYLLDT NWTFAFDLFN QSRDFGTGFR
RNSTGGNLTW GYPLSWESRV FLTYKLEKVG VDESGTISFG QNRAPVEAES IANLFRDGWT
SSLKASVSYD SRNNRLFPTE GWNLNGFFEV ADGKFGSSVI TDEPNKFFRY GGFARHYRPI
WGPFILKLNT EIGVTVNPDE EGVPITERYL IGGIYDVRGY RPRSLGPRVF VQGVGDPSGS
DLRSFTLGGN LQIIGNAEIE FPLFERVGIS GVVFMDVGNA FNLESRYCAS ASGSAGSLSP
KFDPCFLEQF PGSLIHGLRR SVGFGFRWFS PIGPLRFEWG IPLDRQVLPD NEGEEESLVF
EFTIGNFF
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