| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3961 |
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| Symbol | |
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| ID | 8546357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5460496 |
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| End bp | 5463672 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388633 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003268353 |
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| Protein GI | 262197144 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.357683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.258592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTGC TGCACCGACG CCATCGCCGC CGCGCCGCGG CCGCCGACAC GCGCCAGCGC
GGCCGCTTCT CGGGCCTGCG GGCTGGGCTC GCCGGCCTGC TGCTGCTCGG CAGCACCAGC
GCCGCCTTTG CCCAGGCCGA CATCGAGTAC GACCGCGGCC CGGCGGCCGA GCTGTACATC
CGCAAGCGCC CGCCGCCGCC GGCGAGCCCG ACGCTCACGG CCGAGCTCGA GAGCATGCTC
ACGGAGAAGG AGGCCGCGGC CGACGAGAAG CGCCGCGAGG CCATCGAGCT GTTGCGCGCC
TTCATCGACA CCAAGCCCCA GGGCGAGGCC CGCGCCGAGG CGCTGTTCAA GCTGGCCGAG
CTGCTTTGGG AAGACGCGCG CGTGGGCTTT ATCGCCCGCA TGGACCAATA CGAGCGCGCG
CTCGAGGCCT GCCGCCAGGA CGACGAGGGC TGCAAGGAGC GCCCGAGCGA GCCGCGCATC
GACCTCGACG AGCCCGCCGC GCTCTACCGC CAGCTCCTGG CCGAGTTTCC GCAGTTCCGG
CGCGCTGACC TGGTGCTCTA CCTGGTCGGC TTCGCCGCCC GCGAGCAGCA GCAGTACCAG
GAGTCGCTGG AGTATTTCGG CCAGGTGGTC GAACGCTACC CGGACTCGCC GCTGTACGGC
GACGCCTGGA TGATGATCGG CGAGCACTAC TTCAGCACCG GCCAGTGGCC CGAGGCCCGC
GCGGCCTACG CCAACGTGCT GGCGCGCCCG GACTCGCCGA CCTACGACCT GGCGCTGTTC
AAGACCGCCT GGGCCGACTG GAAGCTCGGC GACCCCGATC TGGCCGCGCG CCGCTTCAAG
CAGGTGCTCG ACCTGGCGGT GGAGGCCGAG ACCTCGGGCA GCGCGGTGCA GCGCCGCCGC
CGCGCCCAGC TCCGCGACGA GGCGCTCGAG TACCTGGTGG TGGTGTTCAC CGAGGACCGC
TCGATCTCGG CTCAGGAGGT CTACGACTTC CTGGCCTCGA TCGGCGGCAC GCGCTACTCG
CGCGACGTGC TGGTGCGCGT GGCCGACGCG TATTTCGGAC AGAGCGAATA CGAGCGCGCG
GCCCAGACCT ATCGCTTCCT CATCGATATG AAGCCCACGG GTATCGAGGC CGCCGAGTAC
CAGCGCGCGG TGGTCGAGGC CTACGTGGCC GCGCTGCAGC CCGAGCAGGT CGAGGCCGAG
ATGCGGCTGC TGGTCGAAAA CTACGGGCCG GCGTCGAAGT GGGCCGAGCA GAACGCCAAG
TTCCCGACCC GCAAAGCGCG CTCCGAGCGG CTCACCGAGG CCATGGTGCG CAACACGGCC
AAGAACTACC ACGCCGAGGC CCAGGCCGCC GAGAAGCGCG ACAAGAAGCC GGATCTGGCG
CTCTACACCC AGGCCGCCGA CCTCTACCAG ACCTATCTCA CGGCCTACAC CGAGCACGAG
AACGCCGCCG AGGTGCGCTT TCTGCGCGCC GAGATCCTGT ACTTCAAGCT GGGCAAGCTC
GAGGAGGCCG GCGACGAGTA CCTGGCCGTG GCCCAGCAGA CCCCGGTCGG CAAGTACCAC
AAGGACGCGC TGCTCAAGGC CATGGACGCC TTCGAGAAGG CGCGCCCCGA GAACGCGGGC
AGCGCCGGCC AGCGCGAGCT GTCCGCGGCC GACCGCAAGT TCGCGGCCTC GGTGGACCTC
TACGCCACGC TGTTCCCGGC CGATCCCGAG CTGGTCGGCG TGATCTTCCG CAACGGCGAG
ATGTTCTACG ACTACGGCGA CTACGACGAG GCCATCAAGC GCTACGGCCT CATCGTCACC
AAGTACCCGG ACGACCAGAA CGCGGGCCCC GCCGGTGACC GCATCCTCGA GTCGCTGGCC
AAGGCCGAGG ACTACGAGAA CATCGAGGAG TGGGCGCGCA AGCTCAAGAC CGCCAAGGCC
TTCCAGAGCA AGGAGCAGCA GTCCCGCCTC GACCGGCTGA TCGTCGAGTC GATCGGCAAG
AGCGGCGAGC GCTACGCCGA GGCCGGCGAG TTCGAGAAGG CGGCGAGCTT CTATCTGCGC
ATCCCCCAGG AGTTCCCGCA GCACACCATG GCGGCGCAGG CGCAGATGAA CGCCGGCGTG
ATGTACGAGA AGGCCAAGCG GCCGCAGCGC GCCGGCCAGG CCTATCTGGC GCTGGCCGCG
TCCTATCCCG ACAGTAAAGA GGCGCCCAAG GCGGCCTTTG CGGCCGGCCA GCTCTACGAG
TCGGTGGCGT ATTTCGACCG CGCGGCCGAA GCCTACGAGG TCGTCGCCGA AACATTCCCG
CGCTCGGAGC AGAGCGCGGA CGCTTTGTTC AACGCCGGCC TGCTGCGCCA GTCGCTCGAT
CAGAACGAGC GCGCCATCGA GCACTACCAG ACCTACGCCA AGCGCTACCG CGGCAAGGCC
GACGCCGCCG AGGTCGCCTT CCGCATCGGC GTGGTGTACG AAAACGCCGA GCGCTACGAC
GACGCCGCCG ACGCCTATCG CCGCTACCTC AAGGGTCACG CGCGCAGCGG CCGGCACGTG
GTCGAGGCGC ACACGCGCGT CGGCCGCAGC GAGCTGGCGG CCGGCCGGCT CAAGCGCGCG
GGCAACGAAT TCGACGCCGC GCTCAAGGTG TTCCGCCGGC TCAAGGGCAA GCAACGCGAG
ACCGAGAAGG CGTGGGCGGC CGAGGCCCGC TACCATCAGG GCGAGCTGAT CTACCGTCGC
TTCGAGGCCA TCTCGCTCGA CGTCAAGCCG CGCCGGCTGC GGCGCACGCT CGACAGCAAG
ACCGCGCTGC TGGCCAAGGC CCAGGACGTG TACCTCGACG TGGTCGACTT CGGCGACGCG
CAGTGGGCGA CCGCGGCCCT GTTCCGCATG GGGCGCATCT ACGAGGGCTT TGCCGAGTCG
CTGCGCGACG CGCCGGTGCC CCAGGGGCTG AGCGAGGACG AGGCCGAGAT GTACCGCCAG
GAGCTCGAGA TGTACGTCAT CGAGGTCGAG GAGCAGGCCA TCGACCTGTA CGCGACCGGC
TATCAGAAGG CGCTCGAGCT GGGCGTGTAC AACACCTACA CCAGCCAGAT CCGCACCGCG
CTCGGACGCC TGGACTCGAT CGGCTACCCG CCCGCGCTCG AGGCCCGCGC GCGGGTGCGC
CTGGGCGACC GGGTGCAGCC GCCGAGCGCG GTCGAGGAGG TGGTGCGCGA TGAGTAG
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| Protein sequence | MPLLHRRHRR RAAAADTRQR GRFSGLRAGL AGLLLLGSTS AAFAQADIEY DRGPAAELYI
RKRPPPPASP TLTAELESML TEKEAAADEK RREAIELLRA FIDTKPQGEA RAEALFKLAE
LLWEDARVGF IARMDQYERA LEACRQDDEG CKERPSEPRI DLDEPAALYR QLLAEFPQFR
RADLVLYLVG FAAREQQQYQ ESLEYFGQVV ERYPDSPLYG DAWMMIGEHY FSTGQWPEAR
AAYANVLARP DSPTYDLALF KTAWADWKLG DPDLAARRFK QVLDLAVEAE TSGSAVQRRR
RAQLRDEALE YLVVVFTEDR SISAQEVYDF LASIGGTRYS RDVLVRVADA YFGQSEYERA
AQTYRFLIDM KPTGIEAAEY QRAVVEAYVA ALQPEQVEAE MRLLVENYGP ASKWAEQNAK
FPTRKARSER LTEAMVRNTA KNYHAEAQAA EKRDKKPDLA LYTQAADLYQ TYLTAYTEHE
NAAEVRFLRA EILYFKLGKL EEAGDEYLAV AQQTPVGKYH KDALLKAMDA FEKARPENAG
SAGQRELSAA DRKFAASVDL YATLFPADPE LVGVIFRNGE MFYDYGDYDE AIKRYGLIVT
KYPDDQNAGP AGDRILESLA KAEDYENIEE WARKLKTAKA FQSKEQQSRL DRLIVESIGK
SGERYAEAGE FEKAASFYLR IPQEFPQHTM AAQAQMNAGV MYEKAKRPQR AGQAYLALAA
SYPDSKEAPK AAFAAGQLYE SVAYFDRAAE AYEVVAETFP RSEQSADALF NAGLLRQSLD
QNERAIEHYQ TYAKRYRGKA DAAEVAFRIG VVYENAERYD DAADAYRRYL KGHARSGRHV
VEAHTRVGRS ELAAGRLKRA GNEFDAALKV FRRLKGKQRE TEKAWAAEAR YHQGELIYRR
FEAISLDVKP RRLRRTLDSK TALLAKAQDV YLDVVDFGDA QWATAALFRM GRIYEGFAES
LRDAPVPQGL SEDEAEMYRQ ELEMYVIEVE EQAIDLYATG YQKALELGVY NTYTSQIRTA
LGRLDSIGYP PALEARARVR LGDRVQPPSA VEEVVRDE
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