Gene Hoch_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3935 
Symbol 
ID8546331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5429677 
End bp5430219 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content75% 
IMG OID646388607 
ProductNUDIX hydrolase 
Protein accessionYP_003268327 
Protein GI262197118 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.445815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00928201 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGGTG GCTCCGCGCC GCGGCCGCAG GTGGCGGTCG GCGGTGTCAT CTGGGACAGG 
TGTCCAGACA CCGGTGAGCG GCGGGTGCTG CTGGTGCAGC GCGGCCAGCC GCCGAGCGCG
GGCAAGTGGA CGGTGCCGGG CGGGCGCGTG GAGCCGGGCG AGCGCCTGAG CGACGCGCTG
CGCCGCGAGC TGCGCGAGGA GACCGGGCTG GAGGTCGCGC CCGGCGCGCT GGTCGAGGTG
GTCGAAATCA TCGTGCCGGC AGGCGAAGAC GACGGCGAGG ACGACGGCGA CGGCGGTGAT
GGTTCGTCCG ACGACGGCTT TCACTACGTG ATTCTCGACT ATCTGGCCGA GCTCAGGGGC
GGCGCGCTGG CGCCGGCCAG CGACGTGCGC GACGCGCGCT GGTGCACGGC GGCCGAGATG
GCGGCGCTGC CGCTCACGGG CCAGCTCGAG CGGGTGCTCG ACAAGGCCTG GGCGATGCTC
GACGCCGACG CGGGCGCGGC CCCGGGTACG GCGGCCGAGC CGGACGACGA CGCAGCGCGC
TGA
 
Protein sequence
MSGGSAPRPQ VAVGGVIWDR CPDTGERRVL LVQRGQPPSA GKWTVPGGRV EPGERLSDAL 
RRELREETGL EVAPGALVEV VEIIVPAGED DGEDDGDGGD GSSDDGFHYV ILDYLAELRG
GALAPASDVR DARWCTAAEM AALPLTGQLE RVLDKAWAML DADAGAAPGT AAEPDDDAAR