Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3935 |
Symbol | |
ID | 8546331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 5429677 |
End bp | 5430219 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646388607 |
Product | NUDIX hydrolase |
Protein accession | YP_003268327 |
Protein GI | 262197118 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.445815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00928201 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGGTG GCTCCGCGCC GCGGCCGCAG GTGGCGGTCG GCGGTGTCAT CTGGGACAGG TGTCCAGACA CCGGTGAGCG GCGGGTGCTG CTGGTGCAGC GCGGCCAGCC GCCGAGCGCG GGCAAGTGGA CGGTGCCGGG CGGGCGCGTG GAGCCGGGCG AGCGCCTGAG CGACGCGCTG CGCCGCGAGC TGCGCGAGGA GACCGGGCTG GAGGTCGCGC CCGGCGCGCT GGTCGAGGTG GTCGAAATCA TCGTGCCGGC AGGCGAAGAC GACGGCGAGG ACGACGGCGA CGGCGGTGAT GGTTCGTCCG ACGACGGCTT TCACTACGTG ATTCTCGACT ATCTGGCCGA GCTCAGGGGC GGCGCGCTGG CGCCGGCCAG CGACGTGCGC GACGCGCGCT GGTGCACGGC GGCCGAGATG GCGGCGCTGC CGCTCACGGG CCAGCTCGAG CGGGTGCTCG ACAAGGCCTG GGCGATGCTC GACGCCGACG CGGGCGCGGC CCCGGGTACG GCGGCCGAGC CGGACGACGA CGCAGCGCGC TGA
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Protein sequence | MSGGSAPRPQ VAVGGVIWDR CPDTGERRVL LVQRGQPPSA GKWTVPGGRV EPGERLSDAL RRELREETGL EVAPGALVEV VEIIVPAGED DGEDDGDGGD GSSDDGFHYV ILDYLAELRG GALAPASDVR DARWCTAAEM AALPLTGQLE RVLDKAWAML DADAGAAPGT AAEPDDDAAR
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