| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3912 |
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| Symbol | |
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| ID | 8546308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5395598 |
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| End bp | 5396329 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646388584 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_003268304 |
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| Protein GI | 262197095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.459164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0218623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGG CGGCCGACGC GGCCGACGCG AGCGAGGCGC TGCGCGAGCG GTTGGCGGCG
GTGCGCGCGC GCGTAGAGGC TGCGCTCGAG CGCGCTGGCC GGCCGCGCGA CGCGGCCGAT
ATCGTCGCGG TGTCCAAAAA ACACCCGGCC GCGACCCTGG CGCTGGCACA CCGCGCGGGC
GTGGTCGATG TCGGCGAGAA TTACGTGCAG GAGATGCTCG GCAAGCAGGA CGAGCTGCCG
GCCGAGGTCG CGGGCGCGCT GCGCTGGCAC TTCATCGGCC ACCTGCAGCG CAACAAGGTC
AAGCAGGTGG TCGGGCGCGC GGCCCTGATC CACGCGGTGG ACAGCGAGGC GCTGGCGCGT
GAGATCGAGC GCCGGGCCGG GCAGCAGGAC GTGGTGCAGC CGGTGCTGGT GGCCGTGAAT
CTGGGCGAGG AGGCGCAGAA GAGCGGCATC GCGCGGGACG CGCTGCCGGC GCTGCTGGCG
CTCATGGACG AGCTGCCGCA CCTGCGCTGC GACGGGCTGA TGACCATGCC GCCGCTGGCC
CACTCGTCCG AAGACAGCCG GCCGTATTTC CGCGCGCTGG CGGCGCTGGC GCGCGAGCTG
GCGACCGAGG CGCGGCCGCT GGCGCGGCTG TCGATGGGCA CCACGGGCGA TTTCGAGGTC
GCGCTCGAGG AGGGCGCGAC CCTGGTGCGC GTGGGCACCG CGGTGTTCGG ACCGCGTCCG
CCCGCGTCCT GA
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| Protein sequence | MSEAADAADA SEALRERLAA VRARVEAALE RAGRPRDAAD IVAVSKKHPA ATLALAHRAG
VVDVGENYVQ EMLGKQDELP AEVAGALRWH FIGHLQRNKV KQVVGRAALI HAVDSEALAR
EIERRAGQQD VVQPVLVAVN LGEEAQKSGI ARDALPALLA LMDELPHLRC DGLMTMPPLA
HSSEDSRPYF RALAALAREL ATEARPLARL SMGTTGDFEV ALEEGATLVR VGTAVFGPRP
PAS
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