| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3902 |
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| Symbol | |
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| ID | 8546298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5378643 |
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| End bp | 5384408 |
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| Gene Length | 5766 bp |
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| Protein Length | 1921 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646388574 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003268294 |
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| Protein GI | 262197085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0699787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGG ACACGCGTGA TGCCGAGGAC AAGCCAGCCT TGCCGAGCCA AGAGACGCGG
GAGCGAGCCG GCGGTAACGC CCCTCCCGGC GGCGCGTCGG CGCGGCCCGT GAGCGAGGAC
GCGAGCTTCG AGCCCGACGA GTCCGAGCTG GAGTTCGAGA TCTCCCTCGG ACCCTCGGGC
GACGCCCCGG CCGAGCAGGC CGCCGCCGCG GGCGCCACGC CCGGCGCCGA TGTGCCAGTC
GCTGCTGTTG CCGACCGAGC GTCCGACGAG GGTGACGACA GCGACGAGAG CGAAGAACTC
GAGCTGGACG ACGACATCGT CGAACTCGAC GACGATCTCG TCGAGCTGGA GGAACTCGCC
GCCCCGCCGG CGCCCGCTGC CCCCGCCGTT CCGAGGCCGC GCCGAACGCC GCGTCCGAGC
ACGCCGCCGC CGCTGCCGCC GCGTCCCCCG AGCGCGCGCA TGGCGGTGCC GCGGCCGCTG
AGCGGCTCGG GCTCGGGTGG CGTCCCCGAC GCCGATACCT CCGGCGGCAT GTCGGTCGAT
AGCGGCGGCG TCGTGTTGCG GGCCAGCGAG CACAGCGGCT TGATGCGCCT GCCGGGCTCG
GGGCCGACGC CGAGTCCGCG CGTCGCCGCC GCCGAGATCG CCCGTCCCGC CCAGATCGAC
ATCGCCCACC CCAGCGCGCT CGAGGAGCTG CAGCGGCTGA GCGGCGACGA GCGCGCCCTG
TGGGCCGCGC GTGCCGAGAC CCTGGTGACC CGTATGGACG ACGCCTCCGA GGTCGGCATC
GCGGCCACGC TGGCCTACGA ACTGGGCGAA CTGCGCGATC GCCACCTGGG CGACGAGGAG
GGCGCGCTGG CCGCGCATCG GCGCGCGTTC GACATCGATC CCACGCATCG CGCCAATCTG
TGGGCACTGC AGCGCCTGCT GCAGCGCCGC GGCGACTGGG CGAGCTTCGT CGACGTGATC
GACACTGCCG CCCTGGCCGC GTCCGACGAT CCGCAGCGGG CCCAGCTCTA CCTCGAGAAG
GCCCACGTCT TCGAGGCCCA CCTGCGCGAC GCCGAGAGCG CCCGCGACGC CTACGAGCGC
GCCGCTGCCT TCGATCCGCG CTCGATCGCG GCGCTGCGCG GGCTCGAGCG TCTGTGTCTG
GCCGCGGGCG ATCTCGCCGG CGCCGTCCAC GCCATCACCG CGCTGGCCGC GGCCGTCGAC
GACCCCGCGC AGGCCATGGC CTATCTGCTC GACCTCGCGC GTCTGGCGGC CGATAGCGGC
GACTTGGACA CCGCCCGGGA TGCCCTCGAG CGCGCGGCCG AGAGCGCGTT TGACGCCGTC
GCCGTGGCGC GCGAACGCCT GCATCTGGCC GAGCGCGAGG GCGACGCCGA AGCCCAGATC
GCGGCCCTCG ATGCCTGGCT CGAGGCCGAC GCCCGGGCGC CCGAGGACCG GCGTCTGCCC
GCCATCGAGG TCGCCGCGAT GCGTCGCCAG CAGGCGCGCC TGTCCCGTGA CGTGGTCGGC
GATCTCGACG CCGCCTGGCA GTTCATGCAG GCGGCCATGG CGCAGATGCC GGGCGAGGCC
GTGATCCTCG CCGATCTCGC CGACCTGGCT GAGCGCGTGG GCCGCTACGA AGAGCTGGCC
GCGCTGTTCC AGGGCCTCGA GGCGCTCGAA GGCGAGGGCG CGCAATCGCT CACGCTGCCG
CTGCGCCGCG CCGATGCCCT GCTGCGCAGC GGTCACCGCG CCGAGGCCCA CGCGCTGCTC
GACGCCATGG CCCGCGAGCT GCCGGGCAGC GTGGCCGTGC TGGCGCTGCG CGAGCGCGAC
GCCATGCGCA GCGGTGATTG GGCCCGTCTG GCGCGCGCCT ACGACGACCT CGCCGGCCAT
CCCGAGCAGG TCTTCGTCTC CTCGTCCGAA GACGCGCCGG CGGCCCCGGC GACCGACATA
GACGACGAAC ACCGCGCGCT GGCGGCTGCG GCCGCGACCT GCGCCGGGCA CGCGTGGTCG
TGGCTGGTGG ACGACGGCGA CGCCGCGGCC AGCTCCTTCG CTCGCGCGCT GGTCGCCGTG
CCCGACTACG CGCCCGCCAT CGAGGGCTTG ATCGCGTTGC ACGAGCGCCG CGGCCAGCTC
GCCGAGGCCG CGGCGCTGCT CGAGAGCTAC GCCGAGCGCG GCGACGACGA GACCCGCGCC
TATCGCCTCG AGCGTCTGTG CCGCCTGTAC ACCGAGCTGG AGCGCCACGA CGCCGTGCTC
GGCGTCGAGC ACCGGCTGCT GGCCGTGGTG CCCGCGGGCT TGCCGCAGCA GCGCGTGCGC
TGGCGCATCG AGGCCACCCT GGCGCGGCTG GGCCGGACCC TGGCCCGCGC CGAGGCGTTG
GTCGGACTCG CGGCCGAGAC CGACGATCCC GAGCGCTGCG CCGCGTTGCT GCTGTGGGCC
GCGCGCGCCT TCGAGTCGCT GGCCGACGGC ACCGCTGACG TCGATGCCGC AGCCGCCGCG
ACGGGGGCGC GCGGACAGGC GGACGAATTC GAGTTCGAAT TCGGCGGCGC TGGCGCGGAT
GGCGATGGCC TCGACGAGGC CCAGCGGCGT GCGTGGGCCG GCCGCGCCGC CGATATCTAC
CGCGAGGTTC TGACCCTGTC GCCGGGCAAC CGCTACGCGC AGACCGCCCT GATCGCGCTG
CTGCGCCGGG GCGCCCGCTG GCAGGCGCTG GCCGAGGCGC GCCACGCCGA GGCCGTGGTG
CTGCCCGATG GCCCCGAGAT GGTGCTGGCG CTGCGCGAGG CGGCCGCGAT CCTGCGCGAC
GAGATCGGCG ACGTGCCGGG CGCGATCGGC GTGCTGCGCG ATCTGCTCGA CCGCATGCCC
GGGCACACCG CCGCCATGCA CGAGCTGGCC GAGCTGCTGG CGCGCTGTGG CGATATCGAC
GAGCTGGTCG ACATCCTGGA GCTCGAGAGC GTGGCCGCCG ACCGCCCGGC CACCCAGGTG
CTCGCGATGC TGCGGCTCGG CGTCGCGCTC GAGCGCGCCG GGCACGGCGA CCAAGCGGTG
CCCGCGTACC GCCGGGTGCT CGAGATGGCG CCCGACGCCG CCAGCGCCCA GGCCCTGGAG
CTCGGCGTGG CCCCGGCGCT GGCCGCGGCC GCGGTGTTCG AGCGCGCCGA TGTCGGCGGC
GATCCCGGCG CGCGCATCGA AGCGCTGGAG CTGCTCGCCG GCTTCATCGA GGGGCCCACG
CCCCACGGCG ACGACGAAGA TGAGCGCGGC GACGCCGGCC TGGCTCTGGC GGCCGCGCTG
CGCGAGGATG TCGGCTGGCG CTGGCTGGTC GAGGTCGCGG CCGAGGAGCA CGCACACAGC
GCCTTCGCCC GCGCGCTCGG ACCCGAGGCC GGTGCCGGGG CGAGCGCCGC CGAGTTGCCG
GGCGCGCTGC TGGGCCTGGC GCTTCTGCAG GCTCGGCAGG GCGAATGCGA TGCCTTCGCG
CGCCTGGCCG AGAACACCGC GACGCCGCCG CTGCGCGCCG CTCTGTTTCT GCGCGCTGCG
GCGCTGGCCA CGCGCCGCGG CGAGGTGCGC ACGGCCGCCT ACTGTGCCGA CGCCGCATTT
GCCGCGGCGC CCGAGGATCG CGACGTGGTC GTCGCCGCGT CCGAATACCT GGCCGTGAGC
GAGGACGCCA CCGAGATCGC CGAGGTCACC CTCGACGCCC GCATCGCGCT GTTCGAGCGC
CGCGCCGAGC TGGCTGGCGC GAGCACGCGC GGAGACTGGG ACCTGCGCCG CGCCGAGCTG
CTCGAGCTGC GCGGACGACT GTCCGAATCG GTCGCGGCCG CAGCCGAAGT GCTCAACGCC
AGGCCCGATG ATCTGCGCGC CCTTGAGCTG GTGCGGCGGG TGTGCGAGCG CGCAGGCGAT
CGCGCCGGTT TCGCCCGCGC GACCCTGGCG CTGGCCCGGA CCTGGCCCGA GACGCGCGGC
CGCGTAGACC TGCTGCGCGA GGCCGCCGCT GTGGCCGACG CCGAGCTCGG CGACGCTCGA
CTGGCCGCCT GGGTGTACCG CCGCATCCTC GCCGAGGAGC CGGGGGCAGG CGAGTACGAG
CGCGCCCTGG AGATCTGCCG CGAGCACGAG GACCGGCGCG CCCAGGTCGA GATCCTCAGC
GCGCGCCTCG ACTGGCTGTC GCAGCTCGCC AGCGTAGACC CCCAGGCCGC CCACGGCCAG
GTGCCGCTGT TGCTCGAGCG CGCTCGCCTG CTGCGCGCGG CCGATAACCT CGCCTGTGCG
CACGCCGACC TCACCCGCCT GCTCGCCATC GATGCCAACC ATGTGCAGGG CCTGGCCGCG
CTGGCCGAAG TCGCCGAGAC CCGCGGCGAT GCCCAGGAGG CCGCCGAATG CTGGCGCCGC
TATCTCGGCG GCGAGCCCGA CAGCGCGCGC CGGGCCGCGG CCGAGCGCAC CCTGGCGCGC
CTGCTGTCCG AGCAACTCGG CGACGCCGAG GGCGCGCTCG CCCAGCTCGA GCAGGTCATC
AAGCACACGC CCGACGACCT CTCGGTGCGC GAGCGCCTGG TCGCGCTGCT GGTGCGCACC
GAGTCGTGGC CGCGCGCGGT CCGCGAACTG GGCGAGCTGG CCCGGCGCCG CAGCGATCTC
GGCGACCAGG CCCGCGACCG GCTGCGCATG GCCGAGATCC TCGACGGCCG CATCGGCGAT
CACCGCGGCG CCCTCGAGCA ACTCAAGACC GCGCGCAAGC TGGCCCCCAC CGATCTCGAG
GCCGTCCGCG CGCTGTTCGA GCTGTCGGCC ATGGAGCAGA AGCCCAAGGT GCTGTTCCGC
GCGGCTCGTG ACCTGCGCAC CGCCATCGCC GCACACCCGG CCGACACCTC GCTGTACGAG
CGCCTGGCCG AAGTGACCGC GCTGCAGGAC GACGACGAGG CGGGTTTCTT CGTCGCCTGT
GCGCTGTCGG CGCTGGGCGC GCTGCCCGAG GACCGTCGCG AAGTGCTCGC CCGCGTCGGC
CCCGGTCTGG GCGATGGCCC GCAGATCGAC GGGGCCCTGG CCCCCGAGGA TTTCAGCAAG
TACCTGTCGG CCGTGCGCGA CGATGGCGCC CATCTCGCGG CCGACGTGTG GAAGCTCATC
CAGGCAGCGG TCAGTAAAAA CCTGGGCCTG GATGCCGCCG GGTTCGGCAT GGGCCGCGGT
GAGCGCCTGT CGTCGCGGCA ACTCGAGCGC GATTACGTCC TGCTCGAGCG GGCAGCGCGC
GCCATTGGCC TTGAGGACGC CGAGTTCTAC GTCAGCGCCG CGCAGCCGGC CCTGGCCCGC
GCGCTGGCGC TCGAGCATCC GGTGGTGTGT CTGGGCGCCG ATGTCGCCCG CGGCGAGAGC
CCGGCCGCTC GCTTCGCCCT GGGCCGCTGC CTGCTCGATG CCCACCTCGG TATCGGCGCG
CTCGACCCCC TGTCCGACGA CGCGTTGCTG CGTTACTTCG GCGCGGCGGC GCGCGCCGTT
GATGCCACGC GCCTGCCGCC CGACGTCGAC GTCGCCGGCT TCTCCGCCGA GGCGCTCGAC
AACGCCAGCC GCGAACTGCA GCGTCATCTG AGCCGTCGCG ACCGTCGCCA ACTGGCCCGC
TTGGCCGAGC GCATGGGCGA GCTGGATATC GCCGCGTGGC GGCGTTCGGT GCAGCGCACG
CGTCTGCGCG CGGGCGCGCT CCTGGCCGCC GACCTGCGCG CGCTCGAGCA GATGGTCGCG
AACGACGCCG ATACCGCCCA CAGCGAGGAT GTGGCCGCGG CGCTGCAACC GCTGCTGGTG
TGGACCGTGA GCGACAGCCA TCTGTGGGCG CGCAGGCACC TCGGCCTGTC CCTTCGGCCC
CTCTGA
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| Protein sequence | MAVDTRDAED KPALPSQETR ERAGGNAPPG GASARPVSED ASFEPDESEL EFEISLGPSG
DAPAEQAAAA GATPGADVPV AAVADRASDE GDDSDESEEL ELDDDIVELD DDLVELEELA
APPAPAAPAV PRPRRTPRPS TPPPLPPRPP SARMAVPRPL SGSGSGGVPD ADTSGGMSVD
SGGVVLRASE HSGLMRLPGS GPTPSPRVAA AEIARPAQID IAHPSALEEL QRLSGDERAL
WAARAETLVT RMDDASEVGI AATLAYELGE LRDRHLGDEE GALAAHRRAF DIDPTHRANL
WALQRLLQRR GDWASFVDVI DTAALAASDD PQRAQLYLEK AHVFEAHLRD AESARDAYER
AAAFDPRSIA ALRGLERLCL AAGDLAGAVH AITALAAAVD DPAQAMAYLL DLARLAADSG
DLDTARDALE RAAESAFDAV AVARERLHLA EREGDAEAQI AALDAWLEAD ARAPEDRRLP
AIEVAAMRRQ QARLSRDVVG DLDAAWQFMQ AAMAQMPGEA VILADLADLA ERVGRYEELA
ALFQGLEALE GEGAQSLTLP LRRADALLRS GHRAEAHALL DAMARELPGS VAVLALRERD
AMRSGDWARL ARAYDDLAGH PEQVFVSSSE DAPAAPATDI DDEHRALAAA AATCAGHAWS
WLVDDGDAAA SSFARALVAV PDYAPAIEGL IALHERRGQL AEAAALLESY AERGDDETRA
YRLERLCRLY TELERHDAVL GVEHRLLAVV PAGLPQQRVR WRIEATLARL GRTLARAEAL
VGLAAETDDP ERCAALLLWA ARAFESLADG TADVDAAAAA TGARGQADEF EFEFGGAGAD
GDGLDEAQRR AWAGRAADIY REVLTLSPGN RYAQTALIAL LRRGARWQAL AEARHAEAVV
LPDGPEMVLA LREAAAILRD EIGDVPGAIG VLRDLLDRMP GHTAAMHELA ELLARCGDID
ELVDILELES VAADRPATQV LAMLRLGVAL ERAGHGDQAV PAYRRVLEMA PDAASAQALE
LGVAPALAAA AVFERADVGG DPGARIEALE LLAGFIEGPT PHGDDEDERG DAGLALAAAL
REDVGWRWLV EVAAEEHAHS AFARALGPEA GAGASAAELP GALLGLALLQ ARQGECDAFA
RLAENTATPP LRAALFLRAA ALATRRGEVR TAAYCADAAF AAAPEDRDVV VAASEYLAVS
EDATEIAEVT LDARIALFER RAELAGASTR GDWDLRRAEL LELRGRLSES VAAAAEVLNA
RPDDLRALEL VRRVCERAGD RAGFARATLA LARTWPETRG RVDLLREAAA VADAELGDAR
LAAWVYRRIL AEEPGAGEYE RALEICREHE DRRAQVEILS ARLDWLSQLA SVDPQAAHGQ
VPLLLERARL LRAADNLACA HADLTRLLAI DANHVQGLAA LAEVAETRGD AQEAAECWRR
YLGGEPDSAR RAAAERTLAR LLSEQLGDAE GALAQLEQVI KHTPDDLSVR ERLVALLVRT
ESWPRAVREL GELARRRSDL GDQARDRLRM AEILDGRIGD HRGALEQLKT ARKLAPTDLE
AVRALFELSA MEQKPKVLFR AARDLRTAIA AHPADTSLYE RLAEVTALQD DDEAGFFVAC
ALSALGALPE DRREVLARVG PGLGDGPQID GALAPEDFSK YLSAVRDDGA HLAADVWKLI
QAAVSKNLGL DAAGFGMGRG ERLSSRQLER DYVLLERAAR AIGLEDAEFY VSAAQPALAR
ALALEHPVVC LGADVARGES PAARFALGRC LLDAHLGIGA LDPLSDDALL RYFGAAARAV
DATRLPPDVD VAGFSAEALD NASRELQRHL SRRDRRQLAR LAERMGELDI AAWRRSVQRT
RLRAGALLAA DLRALEQMVA NDADTAHSED VAAALQPLLV WTVSDSHLWA RRHLGLSLRP
L
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