| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3879 |
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| Symbol | |
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| ID | 8546275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5337700 |
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| End bp | 5339727 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646388551 |
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| Product | transketolase |
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| Protein accession | YP_003268271 |
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| Protein GI | 262197062 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.657918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGC TGAGCAAGCG CTGCATCGAC ACCATCCGCA CCCTGTCCAT CGACGCCATC
GAGACGTCGA ACTCGGGGCA CCCGGGACTG CCCATGGGCG CCGCTCCCAT GGCCTTCGTG
CTCTGGGACC GCCACCTGCG CCACAACCCC CGCGACCCGG CCTGGCCCAA CCGCGACCGC
TTCGTGCTCT CGGCCGGCCA CGGCAGCATG TTGCTCTACA GCCTGCTGCA CCTCACCGGC
TACGGGCTGT CGATCGATGA GCTGAAATCC TTCCGGCAGT GGGGCAGCAA GACGCCCGGT
CACCCCGAGA GCTTCATCAC CGACGGGGTC GAGGCCACCA CCGGGCCGCT CGGCCAGGGC
GCGGCCAACG CCGTGGGTAT GGCCATGGCC GAGCGCCATC TGGCCAGCCG CTTCAACCGC
CCGGGCCACG AGATCGTCGA GCACTACACC TACGCGCTGG TCTCCGACGG CGACATCATG
GAGGGCGTGG CCGCCGAGGC CGCGTCCTTG GCCGGACACC TGGGTCTGGG ACGGCTGATC
TACCTCTACG ACTTCAACAA CATCACGCTC GACGGGCCGG CCTCGCTGGC CTTCTCCGAG
GACGTGTGCA AGCGCTACGA GGCCTACGGC TGGCACGTGC AGCGCGTCGA TGAGGGCGAC
ACCGATCTCG ACGCCATCGA CGCCGCTATC GCCGCGGCCA AGGCCGAGCG CGAGCGCCCC
AGCCTGATTC TGGTCAACAC CACCATCGGC TACGGCTCGC CCAAGAAGGC CGGCACCTCG
TCCGCTCACG GCGCGCCGCT GGGCGCCGAC GAGACCAAGG CCACCAAGGC GGCGCTGGGC
TGGCCCACCG ACGCCGCGTA CCTGGTGCCG GACGAGGTCC GCGCGCACAT GGCCGCGGCC
GGCGAGCGCG GCGCCACCGC GCAGACCGCG TGGCAGGAGC AGATGCACGG CTACGCCAAG
GCGCACCCGG AGCTGGCCGA GGCCTGGCGG CAGAGCCTGG CCTGCGAGCT GCCCGCGGGC
TGGGACAGCG AATCCATCGC CTGGGACGAG GGCGCGCAGG TGGCCACGCG CTCGGCCGGC
GCCAAGGTGA TCCAGGCGCT GACGGCCAAG GTGCCGTGGC TGCTGGGCGG CGACGCCGAC
CTGGGCTGCT CGACCAAGAC CCTGCTGCCC GGCGGCGGCG ACTTCGACGG CGCCAGCGGC
GCCGGCCGCA ATATCCACTT CGGCGTGCGC GAGCACGCCA TGGGCTCCAT CTGCAACGGC
ATGGAGTACC ACGGCGGCGT GCGCTCCTAC GCGGCGACCT TCTTCGTGTT TTCGGACTAC
ATGCGCCCGG CCGTGCGCCT GGCCGCGCTC AACCGCCTGC CGGTCATCTA CATCTGGACC
CACGACTCGA TCGGCGTCGG CGAGGACGGT CCCACGCACC AGCCGGTCGA GCAGCTCATG
TCGCTGCGCG CGATGCCCAA CCTGCACGTG GTGCGCCCGG CCGACGCGCG CGAGACCGAA
GAGGCCTGGC GCCACGCGCT TGTTCGGACA GATGGACCAA CCGCCCTGGT GTTCTCGCGC
CAGAACCTGC CCGTGCTGGC GCGTCCGGCC GCGATCGGGG AGGGGCCGCA CTTCCTCGCC
CGCGGCGCCT ACGTGCTGGT CGAAGCCGAC AAGCCCGAGG CCATCGACGT CATCCTCATG
GCCACCGGCT CGGAGGTGAG CCTGGCGGTG GCGGCGCGCG CGCTGCTGGC GGCCGAGGGC
CTGAGCGTGC GCGTGGTGTC GATGCCGTGC ATGGAGCTGT TTCGCGCCCA GAGCGAGGAG
TATCGCGAGT CGGTGCTGCC CGCCGCGGTG CGCGCGCGGG TCTCGGTCGA GGCCGGCTCC
ACCTTCGGCT GGGCCGGCTG GGTCGGCCTC GACGGCGAGT CCGTGGGTCT CGATCGTTTC
GGCGCGTCGG CGCCCGGCGA GGTGCTGATG GAGAAGTTCG GCTTCACGGC CGACAACATC
GCCGCGGCCG CGCGCCGCAC AGTCGAGCGC AACCGCTCCC GGGCCTGA
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| Protein sequence | MDELSKRCID TIRTLSIDAI ETSNSGHPGL PMGAAPMAFV LWDRHLRHNP RDPAWPNRDR
FVLSAGHGSM LLYSLLHLTG YGLSIDELKS FRQWGSKTPG HPESFITDGV EATTGPLGQG
AANAVGMAMA ERHLASRFNR PGHEIVEHYT YALVSDGDIM EGVAAEAASL AGHLGLGRLI
YLYDFNNITL DGPASLAFSE DVCKRYEAYG WHVQRVDEGD TDLDAIDAAI AAAKAERERP
SLILVNTTIG YGSPKKAGTS SAHGAPLGAD ETKATKAALG WPTDAAYLVP DEVRAHMAAA
GERGATAQTA WQEQMHGYAK AHPELAEAWR QSLACELPAG WDSESIAWDE GAQVATRSAG
AKVIQALTAK VPWLLGGDAD LGCSTKTLLP GGGDFDGASG AGRNIHFGVR EHAMGSICNG
MEYHGGVRSY AATFFVFSDY MRPAVRLAAL NRLPVIYIWT HDSIGVGEDG PTHQPVEQLM
SLRAMPNLHV VRPADARETE EAWRHALVRT DGPTALVFSR QNLPVLARPA AIGEGPHFLA
RGAYVLVEAD KPEAIDVILM ATGSEVSLAV AARALLAAEG LSVRVVSMPC MELFRAQSEE
YRESVLPAAV RARVSVEAGS TFGWAGWVGL DGESVGLDRF GASAPGEVLM EKFGFTADNI
AAAARRTVER NRSRA
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