Gene Hoch_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3871 
Symbol 
ID8546266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5326065 
End bp5327633 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content73% 
IMG OID646388542 
ProductVitamin K-dependent gamma-carboxylase 
Protein accessionYP_003268263 
Protein GI262197054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.209528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.249827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTG AGCCGCGGCA GCCCGCGCCC ACGCCCTCGT CCTCATCGTC CGCCGCCTCC 
GCCTCCACCT CCGCCACCGC CAGCGCTCAC GCCGGCCTCG GCGCCCGCGC CGGCCTCGGC
GCCCGCGCCG GCCTCGGCGC CCGCGCCGGC CTCGGCGCCC GCGCCGGCCT CGGCGCCCGC
GCCGGCCTCG GCGCGCGCGC GCGCCAGCAC CTGGCCGCGC CCGTGGACGC GGCCTCGCTG
AGCGCCTTCC GGGCCGTCTT CGGCCTGATG ATGTTCGCCG CCATCGTGCG CTTCTGGCAG
CGCGGCTGGA TCGAAGAGCT CTACCTGGCG CCCGGCTTCC ACTTCCGCTA CTGGGGCTTC
GGCTGGGTCG AGGTGCTGCC CGACGCGCTG ATGTACGCGC TGTTCGCGGC CCTGGCCGCG
CTGGCGCTGG CCATCGCGCT GGGCCTGTTC TACCGGCTCA GCGCGCTGCT CTTCTTCCTC
GGCTTCACCT ACCTCGAGCT CATCGACAAG GCCACCTATC TCAACCACTA CTACCTGGTG
AGCGTGCTCT CGCTGCTCAT GGTGGTGCTG CCGCTGCACC GCGGCCTCTC GCTCGACGCC
GCGCGCCGGC CGGCCCTGCG CGCGGCCACG GTGCCGGCGC TGTGGCTGTG GCTGGTGCGC
GCCCAGGTCG GCCTGGTGTA CTTCTACGCT GGCGTGGCCA AGCTCAAGGG CGACTGGCTG
TTCGAGGCCC AGCCGCTGCA CATCTGGCTG GCCGTGCACA CCGACCTGCC GCTCATCGGC
CCGCTCATGG GCGAGCGCTG GGTGGCCTTT GTCGCGAGCT GGTTCGGCGC CCTCTTCGAC
CTCAGCATCG TCGCCTGGCT GCTCTATCCG CGCACGCGCA TGCCCGCGTT CCTGGTGCTG
GTGGGCTTCC ACGTGTTCAC GGCCGAGCTG TTTCAGCTCG GCATGTTCCC GTGGCTCATG
ATCGGCAACG CGCTGATCTT CTTCCCGCCC TCGTGGCCGC GGCGGCTGTT CGCGCGCCTG
CCCTGGCCGC CCCTGGCCGC GTCCGAATGC GCGGCCCAAC CCGATGCCGC ACCCGCGCAG
CCGTGGCCGG GTCCGCTGCT GCGCGCGCTG CTGGTGGTGC ATCTGAGCGT GCAGGTGCTG
CTGCCGCTGC GCCATCACCT GTATCCCGGC AACGTGTGCT GGACCGAGGA GGGCTTCCGC
TACGCCTGGC ACGTCATGCT GGTCGAGAAG ACCGGACGCG CGGTCTTTCA CGTGCGCGAC
CCGGCGACCG GACGCACCTG GCTGGTGTAT CCGCGCGAGT ATCTGACCCT CCACCAGGAG
CTCCACATGT CGATTCAGCC CGACATGGTG GCCGAGCTGG CGCGCCACAT CGCGGCCGAG
TTCGCGGCCC GCGGCATCGC CGAGGCCGAG GTCGAGGTCA GGGCCGAGGT CTACGTGTCG
CTCAACCGGC GGCCGAGCCG GCTGCTCATC GATCCCGAGG TCGACCTCGC GGCCGTCGGC
GACGGCCTCG GGCCCAAGCC CTGGATCCTG GCCGAGGACA GCGAGCGCGG CGCGGCCCAC
ACGCCGTAG
 
Protein sequence
MATEPRQPAP TPSSSSSAAS ASTSATASAH AGLGARAGLG ARAGLGARAG LGARAGLGAR 
AGLGARARQH LAAPVDAASL SAFRAVFGLM MFAAIVRFWQ RGWIEELYLA PGFHFRYWGF
GWVEVLPDAL MYALFAALAA LALAIALGLF YRLSALLFFL GFTYLELIDK ATYLNHYYLV
SVLSLLMVVL PLHRGLSLDA ARRPALRAAT VPALWLWLVR AQVGLVYFYA GVAKLKGDWL
FEAQPLHIWL AVHTDLPLIG PLMGERWVAF VASWFGALFD LSIVAWLLYP RTRMPAFLVL
VGFHVFTAEL FQLGMFPWLM IGNALIFFPP SWPRRLFARL PWPPLAASEC AAQPDAAPAQ
PWPGPLLRAL LVVHLSVQVL LPLRHHLYPG NVCWTEEGFR YAWHVMLVEK TGRAVFHVRD
PATGRTWLVY PREYLTLHQE LHMSIQPDMV AELARHIAAE FAARGIAEAE VEVRAEVYVS
LNRRPSRLLI DPEVDLAAVG DGLGPKPWIL AEDSERGAAH TP