| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3870 |
|---|
| Symbol | |
|---|
| ID | 8546265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 5324900 |
|---|
| End bp | 5326075 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646388541 |
|---|
| Product | Peptidase M75, Imelysin |
|---|
| Protein accession | YP_003268262 |
|---|
| Protein GI | 262197053 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3489] Predicted periplasmic lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.755425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.516703 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTCG CCACCCGCTC TGTGCTCGCC CCGTATCTGC TGCCCCTGGC GCTGTTGGTG
TCGGCTGCGC CCGCGTGCTC GGACGAGGGC TCGCCCAGCA AGGGCCCCGA CGCCAACCGC
GGCCCCGACG TCCAGGACGT GCTGCGCGAC CTGGCCAACG TCGTGATCGT GCCCGCCTAC
GACGACTTCC GCGCCAGCGC CGAGCAGCTC GAGGCCGCCA CCCGCAGCCT GTGCGCGGCC
CCGGACGCGG CCCAGCTCAC CGCCCTGCGC GGCCAGTGGC GCGACACCCG GGCGCTGTGG
AAGCGCGCCG AGGCGCACGA ATTCGGACCG GCGGCCGATC TCCGCATCGA CACCGCCGTG
GACTTCTGGC CGGTGCGCGC CAGCTCCGTG GACATCGAGC TGGCCAAGAC CGACCCGGTG
CCCGAGGACT ACGCCACCAC CCTGGGCGAC ACGCTCAAGG GCCTGCCGGT GATGGAGTAC
ATCCTCTACG ACGGCGCCAG CGCGGCCGAC GACGCCGACA CCGAGAGCGT GCTGGCGCGC
CTGGTCGACG CCGAGACCGG CGAACCCACG CGCACCTGCG CGTATCTGGT GGCGCTCAGC
GTGGATGTGC ACGCCAAAGC CACGACCCTG TACCAGGCCT GGGCGCCCGA GGGCGAAAAC
TTCGCCGCCG AGCTGGCCAC CGCCGGCCAG GGCAGCACCG CCTACCCCGA CCGCGCCAAG
GCCGTGAGCG CGGTGGTCAA CGACTTCGTC TACCTCATCC AGGAAGTCGA GAGCGTCAAG
CTCGCCGAGC CCCTGGGCAA ACGCGCCGGC GACGTGCCGC AGCCAGACGC GGTCGAGTCA
GCCCGCAGCG ACAGCTCGCG CGCCGACATC GCCGCCAACC TCGCCGGCGT GCGCGCGGTC
TACACCTGCA CCCGCGGCGA CGCCACGGGC GCCAGCTTCC AGGCCGCCGT GGCCGCGCTC
AATCCCGAGC TCGACGCCGC CATCATGGCG CAGCTCGACG ACGCCGACGC CAAGGTCGCC
GCCATCGCCC TGCCGCTCGA GCAGGCCGTG GTCGACGACC CGGCCCCGGT CGAGGCCGCC
TTCGAGAGCA CCAAGGAGCT GTTCCGGCTG ATGGCCGTGG ACATGGTCAA CCTGCTCGGG
GTGACCTTGA ACTTCAGCGA CAACGATGGC GACTGA
|
|---|
| Protein sequence | MPLATRSVLA PYLLPLALLV SAAPACSDEG SPSKGPDANR GPDVQDVLRD LANVVIVPAY
DDFRASAEQL EAATRSLCAA PDAAQLTALR GQWRDTRALW KRAEAHEFGP AADLRIDTAV
DFWPVRASSV DIELAKTDPV PEDYATTLGD TLKGLPVMEY ILYDGASAAD DADTESVLAR
LVDAETGEPT RTCAYLVALS VDVHAKATTL YQAWAPEGEN FAAELATAGQ GSTAYPDRAK
AVSAVVNDFV YLIQEVESVK LAEPLGKRAG DVPQPDAVES ARSDSSRADI AANLAGVRAV
YTCTRGDATG ASFQAAVAAL NPELDAAIMA QLDDADAKVA AIALPLEQAV VDDPAPVEAA
FESTKELFRL MAVDMVNLLG VTLNFSDNDG D
|
|---|
| |