| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3863 |
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| Symbol | |
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| ID | 8546258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5315792 |
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| End bp | 5317747 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 646388534 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003268255 |
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| Protein GI | 262197046 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0863227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTCC CAACCGCTTT GCCCTCGCGG GCTTCCCTGC ATCGTCTTCT GTCCCTGCTC
TCGATCGCGC TGCTGGCGCT CGCGCTCGCG GGCTGTCCCT CGCGCACGCG CCGGGTGATC
TCGCCGGCGC CGCCCGAGCA GGCCGCGCTG CCCGCCGATG GCGACGCCGA GGCGCGCGCG
CGCTTCGAGC AGGCGCGCGC CGATTTTCAG CGCGACGCCG AGGTCCAGCC GGGCTCGGTC
GAGGAGTTCG CGTCCATCGC GCGCGAGTAT CCAGAGGATC CCATCGCGCC CTTCGCGCAT
CTCTACGCCG GCATCGCGGC CATCGAGAGC GGCGCGTACA AGCGGGCCGA GGACAGCCTC
ACCGCGCTGG TGCGCGCCGA CCAGGCCGAG CCCGAGCTCA AGATGCGCGG CCGCCTGTTT
CTGGGCATCG CCAAGAACTA CCTGGGCGAG CACGCGCCCG CGCTCGACTA TTTGCAGACC
GGGCAGGACG CGGTCCACGG CGACGGCGAG CGCGCCGAGT GGCTGGCGGC CATGGCCTCG
GCGCTCGAGG GCACGGGCGC GCGGCTGCGC GCGGTGCGCT ACTACGACGA CTGGTACCCG
CTGGCGCGCG CGGGCGAGCG CGCGTTCATC GTCGCCAAGC TCCAGGACAT CGCCAGCGCG
GCCAGCGGCA GCGAGGTGCG CGCGGCCTAC GAGGGGCTCG GCGACCGCTC GGGCCCGGCG
GCCGCGGTGC TGGGCATGCG CGTGGCCGCG GAGTGGGCGG CCGCGGGCGA GGCCCAGCGC
GCGCGCAGCG TGCGCGCCGA GATCGACGGC GCCCGCCGCG CCATCGGCCT CACCCCGAGC
GCGGCCGCGG GCGCCGGCGA GGGCGGATCG ACCCGGCGCC TGGGCGTGGT CCTGCCGCTG
TCGGGGCGCC GCGGCCGCGC CGGTCAGCTC GCGCTGCGCG GCATCGCGCT GGCCGCCGGC
ACCTTCCCCG ATATCCCCGG CGTGCGCGCC TTCGACGTGT CGGTGCACGA CACCGCGTCG
CAGAGCGCGG GCGCGCGCGG CGCGGTCGAG GCCCTGGTCG ACGAGGGCGT CATCGCCGCG
GTCGGCCCCA TCGACGGCGA CAGCGTCGAC GCCGCGGGCG CGCGCGCCCA CGCCCTGGGC
CTGCCGCTGG TGAGCCTCGA TCCCCTGGGC GGCAAGCGCC CGGGCAGCCG GGCGCCGGCC
GACGGCGTGG TGTTTCACAT CCTGCAGTCG GCCGAGGACC GGGCCGCGGC TCTGGCCCAG
CACGCGCTCG CCCGCGGCGT GCGCCGCTTC GCCATCCTGG CGCCGCACAG CGGCTACGGC
CGCGCCGTGG GCGACGCCTT CAAGGCCGAG GTCGAGCGCG GCGGCGGCGA GGTCGTGGGC
CGCGCCAGCT ACGCGGCCGA CGCGACCTCG TTCGGCGACG CCATCCGCGA GCTCGGCAAG
CGCTTCGAGG CCGTGTTCGT GCCCGAGCAG GCCGCGCGCC TCGAGCTCAT CGCCCCGGCG
CTGGCGGCGG CCGATCTGGT CTCGCGTCCG CACGGCGCCT CGGCGCCCAG GCACGGCCGC
GGCATCCTGC TGCTGTCCAC GGCCGAGTTT CTGGCCCCGC GCTACCTGCG CAACGCCGGC
CGCTACAGCC AGGGCGCCGT GTTCGCGCCC GGCTTCTACC CGGACCGCGA GGACCCGATC
ATCGGCGACT TCGTGACCCG CTACGAGCGC GCCTACGGCG CCGTGCCCAC GCCGCTCGAC
GCCTACGCCT ACGACGCCGC CCGGGTCATC GCCGAAGCCG CGGCCCAGGG CGCGGCCTCG
CGCGGCGAGC TCGGCGCCAT GATGCGCACC GGCGGCGTCA CCGGCGTGAC CGGCAACCTC
AGCTTCGACG GCGCCCGCCG CCGCCGCGAC CGCGGCCTGT TGTTCGCGGT CACGGGCGAC
GGGAGCGCGC AGGCGATTCG CGCGATGCGT GATTGA
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| Protein sequence | MAVPTALPSR ASLHRLLSLL SIALLALALA GCPSRTRRVI SPAPPEQAAL PADGDAEARA
RFEQARADFQ RDAEVQPGSV EEFASIAREY PEDPIAPFAH LYAGIAAIES GAYKRAEDSL
TALVRADQAE PELKMRGRLF LGIAKNYLGE HAPALDYLQT GQDAVHGDGE RAEWLAAMAS
ALEGTGARLR AVRYYDDWYP LARAGERAFI VAKLQDIASA ASGSEVRAAY EGLGDRSGPA
AAVLGMRVAA EWAAAGEAQR ARSVRAEIDG ARRAIGLTPS AAAGAGEGGS TRRLGVVLPL
SGRRGRAGQL ALRGIALAAG TFPDIPGVRA FDVSVHDTAS QSAGARGAVE ALVDEGVIAA
VGPIDGDSVD AAGARAHALG LPLVSLDPLG GKRPGSRAPA DGVVFHILQS AEDRAAALAQ
HALARGVRRF AILAPHSGYG RAVGDAFKAE VERGGGEVVG RASYAADATS FGDAIRELGK
RFEAVFVPEQ AARLELIAPA LAAADLVSRP HGASAPRHGR GILLLSTAEF LAPRYLRNAG
RYSQGAVFAP GFYPDREDPI IGDFVTRYER AYGAVPTPLD AYAYDAARVI AEAAAQGAAS
RGELGAMMRT GGVTGVTGNL SFDGARRRRD RGLLFAVTGD GSAQAIRAMR D
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