| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3853 |
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| Symbol | |
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| ID | 8546246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5302923 |
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| End bp | 5306099 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646388522 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_003268245 |
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| Protein GI | 262197036 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.329833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCT ACGAGATCGC GAAAGAGCTC GATATTCCCA ATAAGGAGCT CATTGCCAAG
ATTCGGGCCC TGGGTCTCGA GGTCAACAAT CATATGTCCT CGCTCGATGC CGATGAGGTG
GCCCGAGTTA AGCGCTCGCT CGAGCGTGAG CGGGTTGCCA GCACCGAGAC CAAGCGCTTG
TCGTCGACGG TTTTGCGCCG TCGCAGCAAG AGCGAGCGTT CGGGAGGCCG CCGCCGCGTG
GTCGCCGAAG GCGGGCAGGA CGAGGCAGCG CCCAGCGCAC CGACGCGCGA GCGCGGCAGC
GGCGGCAATA ACGGTGAGGG CGTCGTGACC CGGCGTCCGG CCGCGCAGGC GCGTCCCAGC
GAGCCTGCGC CGACGCCGAG CGCCCGCGCT GAGAGCAGCC CGCCGCCGGC ACAGGCGCCA
CGTGCGCCCG AGCCGCGCGC GGTCGCCGAG AAGCCGGCCG AGACCCCGCC GCCCGCGGCC
AAGCCGGCCG TCGAAGCGCG CCCGGCCGAG CCCGCTGCGC CGACCCCGGC CCCGGCAGCC
GAGGCCGCCC CGGCCCCGGC CGCGCGCGCC GACAAGCCGG CCGAGGCGCC GCCTGTGGAG
AAGGCTCCGG CGGCTGCCAA GCCCGCGGCC GAGAAGCCGG CGCCGGTCGC CGAGCCCGCG
GCCGAGAAGC CGGCGGCAGC CAAGCCCGCC GAGCCGGCTG CGGCCAGCGC CGACGACAGC
GCGGCCAAGG ACCGCGCGGC GGCCACGGCC AAGCCGCGCT CGCCGGTCAT CGTCAAAGGT
CCGCCCGTGG TCGAGCTGGG CGGCGCCCGC ACCGGCAACG CGCCGGCTCG CGGCAATGCC
AATGCACAGG GACAGGGACA GGGACAGGGA CAGGGACAGG GACAGGCACA GGCCGGCGGT
CCCGCTCGCG AGAGCGCCAG CCGAGAGGCT GCGCCGCAGC CCGAGCAGCG TCCCGCCCCG
GCGGCGCCGG CTCCGACCCC GGCGGCCCCG GCCCCGGCGA CGGCCTCGGC GACGGCTTCA
ACCCCTGGCG AGGGCGGCGG CGGTGAGGAC GAGGATCCGT CCACCGTGAA AAACGTGGCC
GAGAACGCCC GCAACCGCTT CGAGGCCGAG CTGGCGCGTG CGCGTCGCCG CGTGTCCGAG
CGCGAGGAGC AGGAGCGCAA GAAGCGCGAG GCCGCGGCCG AGAAGGAGGC GCAGGCGCGC
GATCCCTCGC GGCCGGCGGT GGGCACGGTC ATCAACCTGC CGACCGCGCG CATCAAGATC
ACCGAGCGCA AGCCGGCGGC TCGTCCCGGC GCTACCCCGA CCCGCGATCG CTTCGGCACG
CGCGGCCGTC AGGGCCGGCA GAAGCGCGAC TTCGGTCGCA AGCGCCAGGC GCCCAAGAAG
CCCGGTAAGC AGACCATCAA GACCACGCCG GCCGAGCACA AGCGCGTCAT CCGCATGGAG
GAGACCATCG CGCTCTCGGA CCTGGCCCGC AACATGGGCA TCAAGGCCAA CGAGGTGCTC
AAGAAGCTGT GGGGCATGGG CATGCTCGGG GTCAACATCA ACACCGCGAT CGACTTCGAC
ACCGCCCAGA TCCTGGCCTC GGAGTTCGGC TACGAGGTGC AGAACGTCGC GTTCCAGGAG
AACACGGTGT TCACCGTCGA GCCCGACGCC GAGGACGATC TCGCGTGGCG CGCCCCGGTG
GTGACGGTCA TGGGTCACGT CGATCACGGC AAGACCTCGC TGCTCGACAC CATCCGCAAG
GCGCGGGTGG CCGCCGGTGA GGCCGGCGGC ATCACCCAGC ACGTGGCCGC CTACAAGGTC
AGCGCGGGCG AGGACTTCGG CGACGTCGTG TTCCTCGATA CGCCCGGCCA CGAGGCGTTC
ACCGCCATGC GCGCCCGCGG CGCCCAGGCC ACCGACATCG CGGTGCTGGT GGTCGCGGCC
AACGACGGCG TCATGCCGCA GACGATCGAG GCCCTGAGCC ACGCCAAGGA CGCGGGCGTC
AGCATCATCG TGGCGGTCAA CAAGTGCGAC CTGCCCGACG CCCAGCCCGA GCGCGTGCGC
CAGCAGCTCG CCGAGCACAG TCTCATCCCC GAGGAGTGGG GCGGCGACAC CATGTACGTG
GATGTCTCGG CGCACACCGG GGAGGGCATC GACAACCTGC TCGAGGGCAT CGCGGTCAGC
GCCGAGGTGC TCGAGCTGCG GGCCAACCCC GAGAAGCCGG CCCGCGGCGT CATCATCGAG
GCCAAGCTCG ACCGCTCGCG CGGTCCCATG GCCACGGTGC TGGTGCAGGA GGGTACGCTC
AAGACCACCG ACGTGGTGGT CGCCGGGCGC TACTACGGCA AGGTCCGCGC CATCCTCGAC
GACCAGGGCA ACACCATCAA AGAGGCCGGC CCGTCCACCC CCGTGGAGCT GCTCGGTCTC
GACGGTGTGC CCGACGCCGG CGAGGCGCTC AACGTCGCCG ACGATGAGAA GACCGCCAAG
CAGGTGGTCG AGCATCGCCG GCAGCAGCAG CGCAAGAAGG AGCTGGCCTC GACCGCCAAG
ATCTCGTTCG AAAACCTCAT GGAGCGCATC CACGAGGGCG AGAACCACGA GCTCAAGGTG
GTGCTCAAGG CCGACGTCCA GGGCTCTGCC GAGGCCGTCA AGCAGGCGCT GATCAAGCAG
TCCACCGAGA AGGTCAAGGT CAACGTCATC CAGGCCGGCG TCGGCGGTAT CACCGAGTCC
GACGTCAACC TGGCCAAGGC CGGTGGCGCC ATCATCGTCG GCTTCCACGT GCGCCCGGCC
GGTAAGTCGG CCAAGCACGC CGAGCAAGAG GGCGTCGAGA TCCGCCTCTA CGACGTCATC
TACGAATGTC TCGAGGACGT GCGTGCGGCC ATGGCCGGAC TGCTGGCGCC CATCAAGCGC
GAGCAGGAGG TGGGCAAGAT GGAGGTCCGC GAGACCTTCC ACATTCCGCG CGTGGGCACG
GTCGCCGGCT GCATGGTCAC CGAGGGCAAG GTGCTTCGGC GCTCGCTGCT CCGGGTCATC
CGCGACGCGG TCCTGGTCTA CGAGGGCAAA GTGGCCAGCT TGCGCCGCTT CAAGGAAGAC
ACCGCCGAGG TCCGCGAGGG CTACGAGTGC GGCCTCATGG TCCAGGGCTT CAACGACATC
CAGGTCGGCG ACGTGGTCGA GTCCTACGAG ATCGTCGAGG AAGCGGCCAA GCTGTAG
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| Protein sequence | MRVYEIAKEL DIPNKELIAK IRALGLEVNN HMSSLDADEV ARVKRSLERE RVASTETKRL
SSTVLRRRSK SERSGGRRRV VAEGGQDEAA PSAPTRERGS GGNNGEGVVT RRPAAQARPS
EPAPTPSARA ESSPPPAQAP RAPEPRAVAE KPAETPPPAA KPAVEARPAE PAAPTPAPAA
EAAPAPAARA DKPAEAPPVE KAPAAAKPAA EKPAPVAEPA AEKPAAAKPA EPAAASADDS
AAKDRAAATA KPRSPVIVKG PPVVELGGAR TGNAPARGNA NAQGQGQGQG QGQGQAQAGG
PARESASREA APQPEQRPAP AAPAPTPAAP APATASATAS TPGEGGGGED EDPSTVKNVA
ENARNRFEAE LARARRRVSE REEQERKKRE AAAEKEAQAR DPSRPAVGTV INLPTARIKI
TERKPAARPG ATPTRDRFGT RGRQGRQKRD FGRKRQAPKK PGKQTIKTTP AEHKRVIRME
ETIALSDLAR NMGIKANEVL KKLWGMGMLG VNINTAIDFD TAQILASEFG YEVQNVAFQE
NTVFTVEPDA EDDLAWRAPV VTVMGHVDHG KTSLLDTIRK ARVAAGEAGG ITQHVAAYKV
SAGEDFGDVV FLDTPGHEAF TAMRARGAQA TDIAVLVVAA NDGVMPQTIE ALSHAKDAGV
SIIVAVNKCD LPDAQPERVR QQLAEHSLIP EEWGGDTMYV DVSAHTGEGI DNLLEGIAVS
AEVLELRANP EKPARGVIIE AKLDRSRGPM ATVLVQEGTL KTTDVVVAGR YYGKVRAILD
DQGNTIKEAG PSTPVELLGL DGVPDAGEAL NVADDEKTAK QVVEHRRQQQ RKKELASTAK
ISFENLMERI HEGENHELKV VLKADVQGSA EAVKQALIKQ STEKVKVNVI QAGVGGITES
DVNLAKAGGA IIVGFHVRPA GKSAKHAEQE GVEIRLYDVI YECLEDVRAA MAGLLAPIKR
EQEVGKMEVR ETFHIPRVGT VAGCMVTEGK VLRRSLLRVI RDAVLVYEGK VASLRRFKED
TAEVREGYEC GLMVQGFNDI QVGDVVESYE IVEEAAKL
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