Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3745 |
Symbol | |
ID | 8546137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5149180 |
End bp | 5149536 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646388414 |
Product | ribosomal protein L20 |
Protein accession | YP_003268138 |
Protein GI | 262196929 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.955368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.405047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGCG CAAAAAGAGG GTTCAAAGCC CGCCGTCGTC GCAACCGCAT CATGAAGGCT GCCAAGGGCT TCCGCGGCAA GCGCCGCAGT TGTCATGCCA TCGCCAACGA GGCGGTGCAG CACGCCTGGA TGCACATGTA CCGCTCGCGC AAGGTGCGCA AGCGCGAGTT CCGCAGCCTG TGGATCGCGC GCATCAACGC CGCCTGCCGC GAGCTCGGGT ACAGCTACTC CAGACTGATG GGCGCCATGA ACGCCAACGG TATGGAGATG AACCGCAAGA TGCTCGCCGA GCTGGCGATT CAGGACCCGG CTGGCTTCAA GGTCGTCGTC GACGACGTCA TGGCCGCGGC CGCCTAA
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Protein sequence | MPRAKRGFKA RRRRNRIMKA AKGFRGKRRS CHAIANEAVQ HAWMHMYRSR KVRKREFRSL WIARINAACR ELGYSYSRLM GAMNANGMEM NRKMLAELAI QDPAGFKVVV DDVMAAAA
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