Gene Hoch_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3745 
Symbol 
ID8546137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5149180 
End bp5149536 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content64% 
IMG OID646388414 
Productribosomal protein L20 
Protein accessionYP_003268138 
Protein GI262196929 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.955368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.405047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCG CAAAAAGAGG GTTCAAAGCC CGCCGTCGTC GCAACCGCAT CATGAAGGCT 
GCCAAGGGCT TCCGCGGCAA GCGCCGCAGT TGTCATGCCA TCGCCAACGA GGCGGTGCAG
CACGCCTGGA TGCACATGTA CCGCTCGCGC AAGGTGCGCA AGCGCGAGTT CCGCAGCCTG
TGGATCGCGC GCATCAACGC CGCCTGCCGC GAGCTCGGGT ACAGCTACTC CAGACTGATG
GGCGCCATGA ACGCCAACGG TATGGAGATG AACCGCAAGA TGCTCGCCGA GCTGGCGATT
CAGGACCCGG CTGGCTTCAA GGTCGTCGTC GACGACGTCA TGGCCGCGGC CGCCTAA
 
Protein sequence
MPRAKRGFKA RRRRNRIMKA AKGFRGKRRS CHAIANEAVQ HAWMHMYRSR KVRKREFRSL 
WIARINAACR ELGYSYSRLM GAMNANGMEM NRKMLAELAI QDPAGFKVVV DDVMAAAA