Gene Hoch_3724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3724 
Symbol 
ID8546114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5127648 
End bp5128802 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content73% 
IMG OID646388391 
ProductCysteine desulfurase 
Protein accessionYP_003268117 
Protein GI262196908 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.252129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.177628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCATCT ACCTCGACCA CAATGCTACC ACCCCTCTGG ATACAGGCGC ACGGCAGGCT 
ATGATCGCCG CCTTGGACAT CGATGGCAAT CCCTCGAGCG TCCATACCGA AGGTCGAGAG
GCGCGCAGCC TCGTCGAGAG CGCGCGGCGC CAGGTCGCCA GCTTGCTCGC CGGCGCTCCC
GAGGACATCA TCTTCACCAG CGGCGGCACC GAGGCCAACG TCCTCGGCCT GGTCGGGCTG
GCCCGCAGCA CGCGGGCGGC GGGCGCCAGA GCCCGGGTCT TGCTGTCCGC GCTCGAGCAC
CCGGCGGTGA GCGGGAGCGC GCGCTCGCTC GCCGACGAGG GCTTCGAGAT CGTCTGGCTG
CCGGTCGACG CCAGCGGCCG TGTGCGCGCC GACGCGCTGG CCGCGCTCGC GCGCGAGGGC
GCCAGCGCCT GCGCGGTGGC CCTGGCCAAT CACGAGATCG GCACCGTGCA GGACGTGGCC
GCGATCGCGG CCCAGTGCGC CGCGCACGGC GTCCCCGTGC ACTGCGACGC GGTCCAGGCC
GCGGGCAAGA TGGCGCTCGA CGCCGCGGCC CTGGGCGTGA GCACGCTGGC CATCTCGGCG
CACAAATTCT ACGGGCCCAA AGGCGTGGGC GCGCTGTGGG TGCGCGCCGG GCTGTCGCTG
CCGCCGCTGT TCAGCTCCGG CCACCAGGAG CGCGAGCGCC GTCCGGGCAC GGAAAACCTC
GCCGGCGTTG CCGGCATGGG CGCGGCCGCG GCGCTCGCCT GCACTCACCA GGCCGCGTGG
GCCACCCAGA TCCGCGCCCA CGCGGCCGCG CTCGAGCGCG GGCTGCGTGC GCTCGACCAG
CGCATCGGCG GGATCCGCAT CCACGGCGAG GACGTGCCCC GCATCGGCAA CACGGTCAAC
GCCGGCTTCA CCGGCGCCCT CGGCGAGAGC CTGGTGGTCG CCCTCGACCT GGCCGGGTTC
GCGGTCTCGG CCGGCGCGGC GTGTACCTCG GGCTCGGTCG AACCATCGGC CGTACTGCTC
GCCATCGGCC AGCCCGCCGA GCGCGCCGTC GAGGCCGTGC GCTTCAGCCT GGGCCGCGAC
AACACCGCGG CAGACATTGA AGCGCTACTT GAAGTATTGC CGGGTATCGT CTCGCGAGCG
CGCAAGTTTC GCTGA
 
Protein sequence
MRIYLDHNAT TPLDTGARQA MIAALDIDGN PSSVHTEGRE ARSLVESARR QVASLLAGAP 
EDIIFTSGGT EANVLGLVGL ARSTRAAGAR ARVLLSALEH PAVSGSARSL ADEGFEIVWL
PVDASGRVRA DALAALAREG ASACAVALAN HEIGTVQDVA AIAAQCAAHG VPVHCDAVQA
AGKMALDAAA LGVSTLAISA HKFYGPKGVG ALWVRAGLSL PPLFSSGHQE RERRPGTENL
AGVAGMGAAA ALACTHQAAW ATQIRAHAAA LERGLRALDQ RIGGIRIHGE DVPRIGNTVN
AGFTGALGES LVVALDLAGF AVSAGAACTS GSVEPSAVLL AIGQPAERAV EAVRFSLGRD
NTAADIEALL EVLPGIVSRA RKFR