Gene Hoch_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3664 
Symbol 
ID8546054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5042981 
End bp5044063 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content66% 
IMG OID646388332 
Producthypothetical protein 
Protein accessionYP_003268058 
Protein GI262196849 
COG category[R] General function prediction only 
COG ID[COG3500] Phage protein D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000879822 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGGCAGAGC AGAATGTAGC TTCGGCAGTT GGCATCAAGG TCACGTGCGG CGAGGAGATC 
TCGGAAGATC ACCTGGTCTC GTTCAGCGTG GAGCAGGATC TCGGCCAGCC CGACATGTGC
ACGGTGACGA TCCGCAACGA GGACAACACC TACTCGGGCT CGCTCACCAT CGGCGCCGAC
GTCAAGATCG CGGTCGGCGA CGGCGCGGGC ACGCCGGTGT TCACGGGCGA GGTCATCGGC
CTCGAGCCGG TCTACAAGGG CAACGGCGAG AACACGGTCA CGGTGCGCGC GTTCAACCGC
CTGCACCGTC TCACCCGCGG TCGCAAGTCC AAGACCTTCC TCGAGCAGAC CGACCAGGAC
ATCGCCAGCG CGATCGCTGG CGAGCACAGC CTCAGCCCGC AGACCGGCAG TGATCCCAAG
ATCACGCACA AGCACGTCTA CCAGCACAAT CAGACCGACC TCGAGTTCTT GCGGGTGCGC
GCCGCCCGGC TCGGCTTCGA GGTCTGGGTC GAGGACAAGA AGCTGTTCTT CGACCAGCCC
AAGAGCGACG TCGACTCGGG CGTGAAGCTG CGCTACGGCG ACGCCGCGAC CTCGACCGAG
GAGGGCGCCG CGTTCCTCAA GTACTTCGCG CCGCGTATGT CCACGGCCAA CGTGGTCAAG
TCGGTGACGG TGCGCGGCTG GAACCCGGAG AAGAAGGAAG AGATCGTCGC CGAGGCCAAG
GCCGAGCCCT CGAAGCTGGG CAGCAAGGGC GCCGATCAGG CCTCGGGCGT GTTCGGCGAC
ACCGCGACCT TCGAGGTCGA TCACCCGGTC TCGAGCGTCG AGGAGGCCAC GGCCATCGCC
AAGGCCAAGC TGCGCGAGGC CATGATGAGC TACATGACGG GCGAGGGCGA GTGCCGCGGC
ACCCCCGAGA TCAAGCCCGG CATCGTCGTC GAGGTCACGA TCAACCCCGA CACCAGCGAC
GACCGCTTCA ACGGCAAGTA CCTGATCACG GGCGCCTCGC ACCGTTACTC CAACCCCACG
CGCGGCGACT CCGGCGGCTA TCTCACCAGC TTCCGCTTCT GCCGCGACGC GGAAGGCCCG
TAG
 
Protein sequence
MAEQNVASAV GIKVTCGEEI SEDHLVSFSV EQDLGQPDMC TVTIRNEDNT YSGSLTIGAD 
VKIAVGDGAG TPVFTGEVIG LEPVYKGNGE NTVTVRAFNR LHRLTRGRKS KTFLEQTDQD
IASAIAGEHS LSPQTGSDPK ITHKHVYQHN QTDLEFLRVR AARLGFEVWV EDKKLFFDQP
KSDVDSGVKL RYGDAATSTE EGAAFLKYFA PRMSTANVVK SVTVRGWNPE KKEEIVAEAK
AEPSKLGSKG ADQASGVFGD TATFEVDHPV SSVEEATAIA KAKLREAMMS YMTGEGECRG
TPEIKPGIVV EVTINPDTSD DRFNGKYLIT GASHRYSNPT RGDSGGYLTS FRFCRDAEGP