| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3643 |
|---|
| Symbol | |
|---|
| ID | 8546033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 5017264 |
|---|
| End bp | 5018799 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646388312 |
|---|
| Product | heat shock protein DnaJ domain protein |
|---|
| Protein accession | YP_003268038 |
|---|
| Protein GI | 262196829 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0455] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.129594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0124484 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACG AACCCATCCC CGCGCATCCC CGGCTCGTGT CGGTCGCCAG TGGCAAGGGC
GGCGCGGGCA AGAGCCTGCT CGCCGCCAAC ATCGGCATCT TCCTGGCCAC CTTGAACAAG
CGCGTGGTGC TCGTGGACGG CGCCCTGGGC AGCCCCAATC TGCACGTGTT CACCGGGCTG
CGGCGGCCGC AGCGCACCAT CACCGAAGCG CTCGACGGCG TGCCCCTCGA AGAGCTGCTC
GAGCCCACGC CGGTACCCGG CCTCGACATC CTCTCGGCCG CGCACGATCC GCTGTGGGCG
GCGCATCTCA AGCCCTCGCA GAGCCGCCGG CTCATCGAGC AGATGCGCGA GCTGCCGGTC
GATTACGTCG TCCTCGACCT CAACGCGGGC ACCAGCAGCC AGATCCTCGA CTGGTTCCTC
GACGCCGATA TCGGCGTGCT GGTGACCGCG GCCGAGCCCA CCTCGGTGCA GCTCTGCTAC
CGCTTCATGT GCGGCGCCTA TCTGCGCAGA TTGCGCCACG CCGAGCTCAA CCGCGCGGTG
CGCCGGCTCA CGGCCGCGAT GCCGCGGCCC CAGGGCGGCA TCGCGGCGCC GCTCGATCTC
TACGAGCAGG CGCGCGCGAG CGATCCCGAG CTGGCGACCG CCATCGCCCG CGAATTGCAG
GGCTTCCGGC CGCACCTGGT GGTCAACGCG GTGCGCTCGA AGTCGGATAT GGAGCTGGGC
CGGGCCGTGG CCTCGGCCGC GCGCCGCCGC CTGGGTATCC CGGTGGTGTA TCTCGGCCAC
CTCGAGTACG ACGAGGCGGT GTGGGCCTCG GTGCAGCGCT CGCGGCCGCT GCTGGTCGAG
CATCCCGAGG CGCGCATCTC CAAATGCATC GAGAAGGTCA CGCGCCGGCT GCTGGCCGCG
CGCGACGGCT CGGCCGACCC CGCGCCCGTG GGCGTGACCC CGACCTACTA CGAGCTCTTC
GACGTCGAGC CCACGGCCAG CTTCGAGGAG ATCCGGCGCG CCAACCGGCG CACGCGCGAG
CTCTACGGCC GCGACTCGCT GGTCATCAGC GGCCTGTACA CCGAGGAGCA GCTCGACGAG
CTGCACCGCT CCTACGACGA GGCCTACGCG GTGCTGATGG ACGCGGCCCA GCGCAAAGCC
TACGACCTCA CGCTGTTCCC CGAGGGCATG CCGTCGCTGG TCGAAGAGGT GCACACCAGC
CCGGTGAAGG TCGAGATCCC GCCGGCCGAG CGCCCGCCCA TGCCGAGCAT CGACGACAGC
ACCGCGTACA CCGGCATGCT GCTGCGCCAG GTCCGCGAGG CCCAGGGCGT GGACCTGCGC
GAGATCTCCG AGCGCAGCAA GATCGGCATG GCGTATCTGC AGGCCATCGA GGACGAGACC
TTCGACAAGC TGCCGGCCCT GGTCTACGTG CGCGGCTTTC TGGTCGAGTA CGCCAAGATC
CTGGGCCTCG AGCGCGCGCG CGTGGTCGAT AGCTACCTCA GCCGCTACCG GGCGGCGCGG
CGCTCGAACC CCGAGGCCGC GCCCAGCCGC GAGTGA
|
|---|
| Protein sequence | MSDEPIPAHP RLVSVASGKG GAGKSLLAAN IGIFLATLNK RVVLVDGALG SPNLHVFTGL
RRPQRTITEA LDGVPLEELL EPTPVPGLDI LSAAHDPLWA AHLKPSQSRR LIEQMRELPV
DYVVLDLNAG TSSQILDWFL DADIGVLVTA AEPTSVQLCY RFMCGAYLRR LRHAELNRAV
RRLTAAMPRP QGGIAAPLDL YEQARASDPE LATAIARELQ GFRPHLVVNA VRSKSDMELG
RAVASAARRR LGIPVVYLGH LEYDEAVWAS VQRSRPLLVE HPEARISKCI EKVTRRLLAA
RDGSADPAPV GVTPTYYELF DVEPTASFEE IRRANRRTRE LYGRDSLVIS GLYTEEQLDE
LHRSYDEAYA VLMDAAQRKA YDLTLFPEGM PSLVEEVHTS PVKVEIPPAE RPPMPSIDDS
TAYTGMLLRQ VREAQGVDLR EISERSKIGM AYLQAIEDET FDKLPALVYV RGFLVEYAKI
LGLERARVVD SYLSRYRAAR RSNPEAAPSR E
|
|---|
| |