Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3618 |
Symbol | |
ID | 8546008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4977243 |
End bp | 4977911 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646388287 |
Product | hypothetical protein |
Protein accession | YP_003268013 |
Protein GI | 262196804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0935243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000427354 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGATC GCCCCGAATT CGACCCAGAG AATCTCACCG AGGAGGAGCT GCGCGCGCAT CTCGACGCCG AGGCCGCGGC CCAGGCCGAG CAGGCCGGCG GCGACCTCAG CGAGGAGCTG GTGCGCAAGT GGGATCCCGA GCGGGTGCTG CGCATGGTGT CGACGCGGGC GGGCCGCGGC GAGCGCCTCG ACGAGTCCAC CCGGCGGCGC TACGAGCGCC GGCTGGGGGC CGACCTCGGC GATGTCCGCA TCTACTCGGG CCCCTTCGCC GAGGAGGTGA CCCGGGCGCA CAGCGCCGAC GCGGTGACCA TCGGCACCAC GGGCATGATC CTCATGAGCG GCTCGCCCAG CAAGTCGATG ACCGGCGCCG CCGGTCGCGC GCTGCTGGCC CACGAGCTCA CCCACGTCGC CCAGGAGCAG CGCTCGGTCC ACCGCAAGGC CGCCTTTGGC GAGGCTGCGC CGCTGGCCAC CGAGGAGCAC GAGGCCGAGG CCGAGGAAGT CGAGGCCGAG GAGATGGCCG GTGGCGCCGA CGATCCGGGC GAGGGCGAGA GCGCCGAGGA GCGGATCGCG CGGCTCAACG AGCTGGTGCG CAAGCGCGTT CTCGACATGT TCGCCGAGGA CGAGCGCGTG CGCCGGATGC GCAACGGCCC ATCGTCTTGG CGCCCGTGA
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Protein sequence | MADRPEFDPE NLTEEELRAH LDAEAAAQAE QAGGDLSEEL VRKWDPERVL RMVSTRAGRG ERLDESTRRR YERRLGADLG DVRIYSGPFA EEVTRAHSAD AVTIGTTGMI LMSGSPSKSM TGAAGRALLA HELTHVAQEQ RSVHRKAAFG EAAPLATEEH EAEAEEVEAE EMAGGADDPG EGESAEERIA RLNELVRKRV LDMFAEDERV RRMRNGPSSW RP
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