Gene Hoch_3607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3607 
Symbol 
ID8545997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4962891 
End bp4963301 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content64% 
IMG OID646388276 
ProductGPW/gp25 family protein 
Protein accessionYP_003268002 
Protein GI262196793 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.307356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00124097 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGCTG GCCGCGAATT CCTCGGCAAG GGGTGGAGGT TCCCCGTTGC CATCAATCTC 
ACCGGAGGCA TCTCTTCCTC GAACCTGGAA GAGAACGTGC GCGAGTCGAT CTTCATCATC
CTCGGCACGG CGCCCGGCGA ACGTCTCATG CGACCGGCCT TTGGCTGCCG CATCCACGAC
CTGATGTTCG CGCCCAACAA CTACGTCACC GCGGCGCTGT CCGAGCATTA CTGCCAGGAG
GCGCTGCTCA AGTTCGAGCC CCGCATCCGC AACGTCGCGG TCGAGGCCGC GCCCTCATCC
GCGGAGCCGA GCCGCCTCGA CATCCGGATT TCGTACGCGG TCGGCGACAC CAACGACCGC
CGCAATCTCG TCTATCCCTT TTATCTGCGC CAGCCCGATG AGGAGCTGTA A
 
Protein sequence
MSAGREFLGK GWRFPVAINL TGGISSSNLE ENVRESIFII LGTAPGERLM RPAFGCRIHD 
LMFAPNNYVT AALSEHYCQE ALLKFEPRIR NVAVEAAPSS AEPSRLDIRI SYAVGDTNDR
RNLVYPFYLR QPDEEL