Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3607 |
Symbol | |
ID | 8545997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4962891 |
End bp | 4963301 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646388276 |
Product | GPW/gp25 family protein |
Protein accession | YP_003268002 |
Protein GI | 262196793 |
COG category | [R] General function prediction only |
COG ID | [COG3628] Phage baseplate assembly protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.307356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00124097 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGGCTG GCCGCGAATT CCTCGGCAAG GGGTGGAGGT TCCCCGTTGC CATCAATCTC ACCGGAGGCA TCTCTTCCTC GAACCTGGAA GAGAACGTGC GCGAGTCGAT CTTCATCATC CTCGGCACGG CGCCCGGCGA ACGTCTCATG CGACCGGCCT TTGGCTGCCG CATCCACGAC CTGATGTTCG CGCCCAACAA CTACGTCACC GCGGCGCTGT CCGAGCATTA CTGCCAGGAG GCGCTGCTCA AGTTCGAGCC CCGCATCCGC AACGTCGCGG TCGAGGCCGC GCCCTCATCC GCGGAGCCGA GCCGCCTCGA CATCCGGATT TCGTACGCGG TCGGCGACAC CAACGACCGC CGCAATCTCG TCTATCCCTT TTATCTGCGC CAGCCCGATG AGGAGCTGTA A
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Protein sequence | MSAGREFLGK GWRFPVAINL TGGISSSNLE ENVRESIFII LGTAPGERLM RPAFGCRIHD LMFAPNNYVT AALSEHYCQE ALLKFEPRIR NVAVEAAPSS AEPSRLDIRI SYAVGDTNDR RNLVYPFYLR QPDEEL
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