| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3567 |
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| Symbol | |
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| ID | 8545957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4911660 |
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| End bp | 4913075 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646388236 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003267962 |
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| Protein GI | 262196753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.20279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0412974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCC TCCCTCACCC ATCCATCCCC GCCCTCGCCC TGTGGCAACG CGCCGCCGAT
CTGTGTGCGC TCGCGCTCGC GGGGGCCCTC GCCGCGGGCT GCGCCAACAC GGCCCATCAC
TCCGCGCTGC GTGGCGACCT GCATGCGGCC GAGTCGCGGC TAACGCTCGC GCCCGCCAGC
GCCGAGGCCC CCGCGGCGCC CTACTTCGAC GGCAGCTTCG ACGGCTATCT GAGCTACGCG
CTGCAGCGCC ACCCCGAGCT GCGCGCCGCC TACCACGACT GGCGGGCCAG CGTTTTGCGC
GCCGCCGCGT CGGCCACCTG GCCCGAGCCG ACGCTGAGCT ACAGTTACTT CCTGCGCAGC
ATCGAGACCC GACTCGGGCC CCAGCGCCAC CGCATCGGCC TGCGCCAGGA GCTGCCCTGG
CCGGCAGAGC TACAGGCCGA CAGCGACGCG CAAGAGGCGA TGGCGCGCGC CGCCCAGGCG
CGCTTCGACG CCGCCTCGCT GGCCATCGCC GAGCGCGTGG CCCGGCCCTA CTGGCAGCTC
TGGCTGCACG CGCGCATGCA CGCCATCCAC CACGACATGC GCGCGGTGCT GCTGGCGCAT
ATCGAGGGCG TGCGCGCGCG CATCGCGGTC GGCGAGGCGA CCCTGGGCGA CCTCGGCCAG
ATCGAGCTGG TGCTGGCGCG CCTCGACGAT CGCCTGCAGA GCCATCTGCT CAGCGCCGCG
GCCGCGCGCG CCCAGCTCGC GGCCGCGGTC GCGGCGCCGC CGGGCACGCC GCTGCCGATC
GCGCCCGACC CGCTGACCAT CGGTCTGCCC CGCGCCGACA TCGACGAGCT GCGCACGGCC
GCGTTCGCGC ACCCGCGGCT GCGCGGCTAC GAACTCGACG CGCGAGCCGC CGAGGCCCGC
GCCGCGCGCG CCCACAGCGA CGGGTATCCC ACGCTCGCGC TGGGCCTCGA ATACATCGAG
ATCGGACCCG CCGCGCAGCC CGGCGTGGAC GACAGCGGGC GCGACGCCGT GTCCGCGTCG
CTGACGCTGT CGCTGCCGCT GTGGCGCGGC GCCTACGGCG ATGAGGAGCA GGCCGCGCGC
GAGCAAGGCA TGGCCCGACG CGCCGAGGGA GGGGCTGCGC GCGACCAGGC GGCGGCCGAG
CTCGAGCGCG CGCTCACCGA GGTACGCGAC GGCGCCCGGC GCGTGGCCGT ATACCGCGAC
GTGCTCATCC CGCAGGCCGA GACCGTGCTG GGCTCGGTCT CGGGCGAATA CCAGACCGGC
CGCGGCTCGC TGGCCGCGCT GCTGTTCGCC CAACGCGAAC TCTACGAACT ACAAGTACAA
CACGCCCGCG CCGAGCACGA CTTCGCCGTC GCCTGGGCCG AGCTCGAGTA CATTGTCGGC
CACCCGGTCG AACGCGCACC GGAGGAGACA CCATGA
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| Protein sequence | MDRLPHPSIP ALALWQRAAD LCALALAGAL AAGCANTAHH SALRGDLHAA ESRLTLAPAS
AEAPAAPYFD GSFDGYLSYA LQRHPELRAA YHDWRASVLR AAASATWPEP TLSYSYFLRS
IETRLGPQRH RIGLRQELPW PAELQADSDA QEAMARAAQA RFDAASLAIA ERVARPYWQL
WLHARMHAIH HDMRAVLLAH IEGVRARIAV GEATLGDLGQ IELVLARLDD RLQSHLLSAA
AARAQLAAAV AAPPGTPLPI APDPLTIGLP RADIDELRTA AFAHPRLRGY ELDARAAEAR
AARAHSDGYP TLALGLEYIE IGPAAQPGVD DSGRDAVSAS LTLSLPLWRG AYGDEEQAAR
EQGMARRAEG GAARDQAAAE LERALTEVRD GARRVAVYRD VLIPQAETVL GSVSGEYQTG
RGSLAALLFA QRELYELQVQ HARAEHDFAV AWAELEYIVG HPVERAPEET P
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