Gene Hoch_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3528 
Symbol 
ID8545917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4861935 
End bp4862351 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content69% 
IMG OID646388196 
ProductNUDIX hydrolase 
Protein accessionYP_003267923 
Protein GI262196714 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.321169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.283085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAACTC GTACGTTGGT CGTCGCCGGA TTGATCACCG CAAACGACGG GCGCCTGCTC 
ATCACCCAGC GACGCGCGGA TCAATTCGCG GCGCTGGGCT GGGAGTTTCC CGGCGGCAAG
CTCGAGCCCG AGGAGTCGCC GGAATCCGCC CTGCGCCGCG AGCTGCGCGA GGAGATCGAC
GCTCGCGCCG AAATCGGCCG CATCTGGGAG GTGCTCTTCC ATCCCTACCC GGACTTCGAT
CTGCTGATGT TGGTCTATCA CTGCCGCCTG CTGCCGGGCG AGAGCGCGCG GGCACGCGAG
GTCGCCGACC TGGCCTGGTG CGAGGTCGCC GCGCTCGGCG ATTACGACAT CATGAACGCT
GACCTGCCGC TGGTGGCGCG GCTGCAGCGC GAGGGCGTGC CCGCCTGGGT GAGGTGA
 
Protein sequence
MRTRTLVVAG LITANDGRLL ITQRRADQFA ALGWEFPGGK LEPEESPESA LRRELREEID 
ARAEIGRIWE VLFHPYPDFD LLMLVYHCRL LPGESARARE VADLAWCEVA ALGDYDIMNA
DLPLVARLQR EGVPAWVR