| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3520 |
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| Symbol | |
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| ID | 8545909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4853946 |
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| End bp | 4855196 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646388188 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003267915 |
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| Protein GI | 262196706 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0642417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.207368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAGCC TCGGCATCTT CAGTCTCGAC CGCTGGCACG AGATCTTCGA CACCATCCGG
CGCAACAAGC TGCGCACCCT GCTCACGGCG CTGAGCGTGG CCTGGGGCAT CTTCATGCTG
GTGATCCTGC TGGCCGCCGG CACCGGCGTG CGCAAGAGCA CCGAGTACGA CTTCCGCGAC
GACGCCATCA ACAGCCTGTG GCTGTGGGCC GGGCAGACAT CGATTCCGTA CGAGGGCCAC
GCCGTCAATC GCAGCATCGA GTTCACCAAC GCCGACCTCG AGCGCCTGCG CGCGACCATC
CCCGAGGTCG AGTACCTCAC CGGCCGCTTC TACCTGCGCG GCGACCGGCT GGTGAGCCGC
GGCAGCAAGA GCTCGGCCTT CGACGTGCGG GCCTGCCACC CCGACCACCA GCACATCGAG
AAGACCATCA TCATCGCCGG CCGCTTTCTC GACGATCTCG ACATCGACGA GCGCCGCAAG
GTGGCCGTCA TCGGCATCGA GGTCGCCGAG TTCCTGTTCG CCGAGGGCGA GCAGCCGCTG
GGCCAGTGGA TCGCCATCAA CGGCATCCAG TACCGCGTGG TCGGCGTGTT CGAGGACGAG
GGTGGCGAGG GCGAGCTGCG CAAGATCTAC ATCCCCATCT CGACCGCGCA GATGGCCTAC
GGCGGCGCCG AGACCATTCA TCAGCTCATG TTCACGGTCG GCGACGCCAC GGCCGAGGAG
AGCCGGGCCA TCGAGGAGGC CGTGCGCGCC AGCCTGGCCG AGCGCCACCA CTTCGACCCC
GAGGACCAGC GCGCGCTGCG CATCCGCAAC AGCGTCGAGA ACTTCGAGCA GATCAGCGGC
ATCTTCCGCG CCATCGAGCT GTTCGTGTGG TTCATCGGCG CCGGCACCAT CGGCGCCGGC
ATCGTCGGCG TGAGCAATAT CATGCTCATC TCGGTCAAGG AGCGCACCAA GGAGATCGGC
GTGCGCAAGG CCCTGGGCGC CAGCTCGGGC GACATCATCG GCCAGATCCT GCAGGAGTCG
ATCTTCCTCA CCGCGGTCGC CGGCTACCTG GGTCTGCTCG CCGGCATCGG CCTGGTCGAG
CTGTTCCGCC GCTACGCGCC CGCGCTCGAC TCGCTGCGCG ACCCCGAGGT CGATCTCGGC
GTCGCGCTCG CGGCCACGCT CATCCTCATC GTCGCCGGCG GCATCGCCGG CTACTTCCCC
GCTCGCCGCG CCGCCCGGGT CGATCCGGTG GTGGCGCTGA GGGACGCCTG A
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| Protein sequence | MYSLGIFSLD RWHEIFDTIR RNKLRTLLTA LSVAWGIFML VILLAAGTGV RKSTEYDFRD
DAINSLWLWA GQTSIPYEGH AVNRSIEFTN ADLERLRATI PEVEYLTGRF YLRGDRLVSR
GSKSSAFDVR ACHPDHQHIE KTIIIAGRFL DDLDIDERRK VAVIGIEVAE FLFAEGEQPL
GQWIAINGIQ YRVVGVFEDE GGEGELRKIY IPISTAQMAY GGAETIHQLM FTVGDATAEE
SRAIEEAVRA SLAERHHFDP EDQRALRIRN SVENFEQISG IFRAIELFVW FIGAGTIGAG
IVGVSNIMLI SVKERTKEIG VRKALGASSG DIIGQILQES IFLTAVAGYL GLLAGIGLVE
LFRRYAPALD SLRDPEVDLG VALAATLILI VAGGIAGYFP ARRAARVDPV VALRDA
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