Gene Hoch_3495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3495 
Symbol 
ID8545884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand- 
Start bp4823301 
End bp4823963 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID646388163 
ProductDNA-3-methyladenine glycosylase II 
Protein accessionYP_003267890 
Protein GI262196681 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.482188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGG CCATGTCCCG CGCCCCCGCC TCGGCCCAGC CCGTCCTCGA CATCGCCGCC 
TCGCTCGTCC ATCTGCGCGG CACCGGCGCG CACATGCCGG CGCTCATCGC CGTCCACGGC 
CCGCCCGATC TCGCGCGCAC GCGCAACAGC TTCGCCTCGC TGGGCCGCGC CATCGTCTAC 
CAGCAGCTCG CCACCCGCGC CGCCGCCGCC ATCTACGCCC GCTTCCTGGC GCTGTTTCCG 
CGCGGCCGCT TCCCCACCCC GGCAGCGCTC CTTGCGGTGT CCGAGGACAC CCTGCGCAGC 
GCCGGCCTGT CGCGCGCCAA GGCCACGGCG CTGCGCGATC TCGCGGCCAA GTTCGCCGAC 
GGCAGCGTGC GCTCGCGGCA GTTCTCGCGC ATGGACGCGG ACGAGCTGCG CGCGACCCTC 
ACCCAGGTGC GCGGCATCGG CCCCTGGTCG GTGGACATGT TCCTCATCTT CGGCCTGATG 
CGCCCCGACG TGCTGCCGGT CGGCGACCTC GGCGTGCGCA AGGGCATGCA GCGCTACTTC 
GAGCTCGAGG AGCTGCCCAA GCCGGCCGAG ATGCAGGAGC TGGCCGCGCC CTGGGCGCCG 
TTCCGCTCGG TGGCGAGCTG GTACATGTGG CGCGTGGCCG AAAACGGCAT CCCCGGTCGC 
TGA
 
Protein sequence
MLAAMSRAPA SAQPVLDIAA SLVHLRGTGA HMPALIAVHG PPDLARTRNS FASLGRAIVY 
QQLATRAAAA IYARFLALFP RGRFPTPAAL LAVSEDTLRS AGLSRAKATA LRDLAAKFAD 
GSVRSRQFSR MDADELRATL TQVRGIGPWS VDMFLIFGLM RPDVLPVGDL GVRKGMQRYF 
ELEELPKPAE MQELAAPWAP FRSVASWYMW RVAENGIPGR